FFCP PHASE1:Hg19::chr12:57898044..57898048,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4141 | |EntrezGene=4141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6898 | |HGNC=6898 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=275bp_to_ENST00000549603_5end | |association_with_transcript=275bp_to_ENST00000549603_5end | ||
|cluster_id=chr12:57898044..57898048,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_30_at_MARS_5end | |description=CAGE_peak_30_at_MARS_5end | ||
|id=chr12:57898044..57898048,+ | |id=chr12:57898044..57898048,+ | ||
|ontology_enrichment_celltype=CL:0000039!7.42e-11!7;CL:0000586!7.42e-11!7 | |ontology_enrichment_celltype=CL:0000039!7.42e-11!7;CL:0000586!7.42e-11!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.76e-57;7!CL:0000586;4.76e-57;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.76e-57,7;CL:0000586,4.76e-57,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.00e-40;10!UBERON:0005564;2.00e-40;10 | |||
|ontology_enrichment_disease=DOID:1799!3.58e-09!1;DOID:10165!3.58e-09!1;DOID:1798!3.58e-09!1 | |ontology_enrichment_disease=DOID:1799!3.58e-09!1;DOID:10165!3.58e-09!1;DOID:1798!3.58e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;3.41e-19;22!DOID:2994;3.41e-19;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.41e-19,22;DOID:2994,3.41e-19,22 | |||
|ontology_enrichment_uberon=UBERON:0005705!1.89e-09!1;UBERON:0008193!1.89e-09!1;UBERON:0002514!1.89e-09!1;UBERON:0003462!1.89e-09!1;UBERON:0008001!1.89e-09!1;UBERON:0007914!1.89e-09!1;UBERON:0003457!1.89e-09!1;UBERON:0009292!1.89e-09!1;UBERON:0007375!1.89e-09!1;UBERON:0003323!1.89e-09!1;UBERON:0002397!1.89e-09!1;UBERON:0001709!1.89e-09!1;UBERON:0004066!1.89e-09!1;UBERON:0002244!1.89e-09!1;UBERON:0005620!1.89e-09!1;UBERON:0004068!1.89e-09!1;UBERON:0004362!1.89e-09!1 | |ontology_enrichment_uberon=UBERON:0005705!1.89e-09!1;UBERON:0008193!1.89e-09!1;UBERON:0002514!1.89e-09!1;UBERON:0003462!1.89e-09!1;UBERON:0008001!1.89e-09!1;UBERON:0007914!1.89e-09!1;UBERON:0003457!1.89e-09!1;UBERON:0009292!1.89e-09!1;UBERON:0007375!1.89e-09!1;UBERON:0003323!1.89e-09!1;UBERON:0002397!1.89e-09!1;UBERON:0001709!1.89e-09!1;UBERON:0004066!1.89e-09!1;UBERON:0002244!1.89e-09!1;UBERON:0005620!1.89e-09!1;UBERON:0004068!1.89e-09!1;UBERON:0004362!1.89e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.99e-50;8!UBERON:0003135;6.80e-37;11!UBERON:0000991;4.86e-20;21!UBERON:0003101;3.41e-19;22!UBERON:0000079;3.41e-19;22!UBERON:0003133;3.96e-11;44!UBERON:0002323;3.68e-09;45!UBERON:0000922;3.55e-08;49!UBERON:0005156;1.92e-07;59!UBERON:0000990;1.92e-07;59!UBERON:0004458;7.94e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.99e-50,8;UBERON:0003135,6.80e-37,11;UBERON:0000991,4.86e-20,21;UBERON:0009196,4.86e-20,21;UBERON:0009117,4.86e-20,21;UBERON:0005564,4.86e-20,21;UBERON:0004176,3.41e-19,22;UBERON:0003101,3.41e-19,22;UBERON:0000079,3.41e-19,22;UBERON:0002323,7.07e-10,46;UBERON:0003133,1.62e-09,48;UBERON:0004458,2.38e-09,49;UBERON:0003886,1.34e-08,54;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59;UBERON:0002553,9.44e-08,61 | |||
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|short_description=p30@MARS | |short_description=p30@MARS | ||
}} | }} |
Latest revision as of 14:52, 19 September 2015
Short description: | p30@MARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_MARS_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 275bp_to_ENST00000549603_5end |
EntrezGene: | MARS |
HGNC: | 6898 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.76e-57 | 7 |
germ cell | 4.76e-57 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.99e-50 | 8 |
male reproductive organ | 6.80e-37 | 11 |
gonad | 4.86e-20 | 21 |
indifferent external genitalia | 4.86e-20 | 21 |
indifferent gonad | 4.86e-20 | 21 |
gonad primordium | 4.86e-20 | 21 |
external genitalia | 3.41e-19 | 22 |
male organism | 3.41e-19 | 22 |
male reproductive system | 3.41e-19 | 22 |
body cavity | 7.07e-10 | 46 |
reproductive organ | 1.62e-09 | 48 |
body cavity or lining | 2.38e-09 | 49 |
body cavity precursor | 1.34e-08 | 54 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
anatomical cavity | 9.44e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.41e-19 | 22 |
germ cell cancer | 3.41e-19 | 22 |