FFCP PHASE1:Hg19::chr15:89346682..89346691,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:89346682..89346691,+
|short_description=p4@ACAN
|description=CAGE_peak_4_at_ACAN_5end
|association_with_transcript=8bp_to_ENST00000268134,ENST00000439576,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=176 | |EntrezGene=176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=319 | |HGNC=319 | ||
|TSSclassifier=strong | |||
|UniProt=P16112,E7EX88,E7ENV9,Q6PID9 | |UniProt=P16112,E7EX88,E7ENV9,Q6PID9 | ||
|association_with_transcript=8bp_to_ENST00000268134,ENST00000439576,NM_001135,NM_013227,uc002bmx.2,uc002bna.2,uc010upo.1,uc010upp.1_5end | |||
|cluster_id=chr15:89346682..89346691,+ | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_4_at_ACAN_5end | |||
|id=chr15:89346682..89346691,+ | |||
|ontology_enrichment_celltype=CL:0000153!2.01e-09!9;CL:0000447!2.01e-09!9;CL:0002620!1.13e-08!23;CL:0000057!3.13e-08!75;CL:0000667!8.92e-08!6;CL:0000058!8.92e-08!6;CL:0000138!8.92e-08!6;CL:0000055!8.90e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000153;8.45e-25;9!CL:0000447;8.45e-25;9!CL:0000138;1.50e-19;6!CL:0002620;8.93e-17;23!CL:0000327;1.85e-14;15!CL:0000499;1.01e-11;28!CL:0000214;3.37e-07;3!CL:0002556;3.39e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,8.60e-25,9;CL:0000447,8.60e-25,9;CL:0000058,1.50e-19,6;CL:0000138,1.50e-19,6;CL:0002620,9.17e-17,23;CL:0000057,7.12e-16,76;CL:0000327,1.87e-14,15;CL:0000499,1.00e-11,28;CL:0000214,3.42e-07,3;CL:0002556,3.50e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-12!115;UBERON:0001049!2.32e-08!57;UBERON:0005068!2.32e-08!57;UBERON:0006241!2.32e-08!57;UBERON:0007135!2.32e-08!57;UBERON:0002020!7.84e-08!34;UBERON:0003528!7.84e-08!34;UBERON:0003075!2.29e-07!86;UBERON:0007284!2.29e-07!86;UBERON:0001893!9.35e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;7.44e-11;46!UBERON:0002416;7.44e-11;46!UBERON:0002097;6.73e-09;41!UBERON:0004457;3.62e-08;9!UBERON:0000042;3.62e-08;9!UBERON:0003102;2.75e-07;50!UBERON:0006915;3.37e-07;3!UBERON:0007616;3.37e-07;3!UBERON:0002217;3.37e-07;3!UBERON:0002018;3.37e-07;3!UBERON:0001758;3.39e-07;6!UBERON:0003672;3.39e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,8.31e-13,46;UBERON:0002416,8.31e-13,46;UBERON:0002097,2.13e-12,41;UBERON:0003102,1.50e-08,99;UBERON:0006915,3.42e-07,3;UBERON:0007616,3.42e-07,3;UBERON:0002217,3.42e-07,3;UBERON:0002018,3.42e-07,3;UBERON:0001758,3.50e-07,6;UBERON:0003672,3.50e-07,6 | |||
|phase1_expression=0,0.428201047781966,0,4.00293193412522,0,0,5.06599756336621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,16.62620100969,21.0561922467074,13.3258797443958,19.0868627292264,70.0754213235796,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0,0,2.22540236350701,0,0,0,0.125118519871964,0,5.26773145057006,6.43624371177941,6.61047459189026,0.113432183160021,5.02290979928813,1.70845911054854,0,0,0,13.912589162464,6.88632368426882,7.59493495085698,3.89748020644795,0,0,1.13152239773168,9.58525899794859,1.61203357164224,3.39121184620975,0,0,0,0.609868530647977,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91699884393266,8.04033550838797,4.27910715122155,0,0.821905290201534,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0.601892199455438,0,0,3.98535359121262,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,0,11.5096479966047,1.40330047216537,0.256278298511402,4.60536524160033,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,18.7885795414921,16.1354497550352,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,5.37969568277888,0,0,0,0,1.55519793830904,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,1.5796644907122,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,3.84167259326905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.315222829196793,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.39669780522807,0,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.0062716070103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,1.71697852591396,0.673498977531838,3.78554694685953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0.484100767249525,0,0,0,0,0,0,0,0,3.77940822020922,0.0752103283492573,0.60511520611056,0,0,0,0,0.337687923091973,0,0.826747186004736,0.380494861163441,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,2.4285549652957,0,0,0.356760272332706,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0.8453114551668,17.8423470422208,0,0.193373663920732,0,0,0,0,0,0,0.286679166302903,0,0.339957450954573,0.436350690340377,0,2.60396512716726,7.39481005810269,0.432626562123789,0,0,0,0.509944148709909,0,0,0.250707539292375,0.303114792872958,0,0,0,0,4.52322419781107,0,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0,0,0.502055437748735,7.98384855710432,0,0,0,0,2.34640942403454,0.611207220914332,2.44137706989443,0,0.201273793591026,0 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| ||
|short_description=p4@ACAN | |||
}} | }} |
Latest revision as of 15:43, 19 September 2015
Short description: | p4@ACAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACAN_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 8bp_to_ENST00000268134, ENST00000439576, NM_001135, NM_013227, uc002bmx.2, uc002bna.2, uc010upo.1, uc010upp.1_5end |
EntrezGene: | ACAN |
HGNC: | 319 |
UniProt: | P16112E7EX88E7ENV9Q6PID9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 8.60e-25 | 9 |
carbohydrate secreting cell | 8.60e-25 | 9 |
chondroblast | 1.50e-19 | 6 |
chondrocyte | 1.50e-19 | 6 |
skin fibroblast | 9.17e-17 | 23 |
fibroblast | 7.12e-16 | 76 |
extracellular matrix secreting cell | 1.87e-14 | 15 |
stromal cell | 1.00e-11 | 28 |
synovial cell | 3.42e-07 | 3 |
fibroblast of periodontium | 3.50e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
integument | 8.31e-13 | 46 |
integumental system | 8.31e-13 | 46 |
skin of body | 2.13e-12 | 41 |
surface structure | 1.50e-08 | 99 |
stratified squamous epithelium | 3.42e-07 | 3 |
layer of synovial tissue | 3.42e-07 | 3 |
synovial joint | 3.42e-07 | 3 |
synovial membrane of synovial joint | 3.42e-07 | 3 |
periodontium | 3.50e-07 | 6 |
dentition | 3.50e-07 | 6 |