FFCP PHASE1:Hg19::chr2:204801479..204801497,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:204801479..204801497,+ to FFCP PHASE1:Hg19::chr2:204801479..204801497,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29851 | |EntrezGene=29851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5351 | |HGNC=5351 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000435193_5end | |||
|cluster_id=chr2:204801479..204801497,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_ICOS_5end | |||
|id=chr2:204801479..204801497,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.09e-39!140;CL:0000037!1.81e-32!172;CL:0000566!1.81e-32!172;CL:0002032!1.40e-29!165;CL:0000837!1.40e-29!165;CL:0002087!7.35e-29!119;CL:0000988!7.92e-29!182;CL:0002031!9.64e-28!124;CL:0000084!4.25e-21!25;CL:0000827!4.25e-21!25;CL:0000791!3.78e-20!18;CL:0000789!3.78e-20!18;CL:0002420!3.78e-20!18;CL:0002419!3.78e-20!18;CL:0000790!3.78e-20!18;CL:0000766!1.43e-16!76;CL:0000838!2.08e-16!52;CL:0000542!7.37e-16!53;CL:0000051!7.37e-16!53;CL:0002057!3.13e-14!42;CL:0000763!4.03e-14!112;CL:0000049!4.03e-14!112;CL:0000860!1.33e-12!45;CL:0000625!1.67e-12!11;CL:0000557!2.54e-12!71;CL:0002009!3.80e-12!65;CL:0002194!2.93e-11!63;CL:0000576!2.93e-11!63;CL:0000040!2.93e-11!63;CL:0000559!2.93e-11!63;CL:0000839!4.08e-11!70;CL:0000624!2.42e-08!6;CL:0000094!5.95e-08!8;CL:0000990!8.22e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.95e-26;18!CL:0000789;1.95e-26;18!CL:0002419;1.95e-26;18!CL:0000084;3.39e-26;25!CL:0000625;3.38e-16;11!CL:0002087;2.20e-11;104!CL:0000624;1.25e-10;6!CL:0000542;3.88e-10;53!CL:0000094;4.62e-10;8!CL:0000860;1.94e-09;33!CL:0002057;1.94e-09;33!CL:0000738;8.80e-09;136!CL:0000576;1.40e-07;48!CL:0000766;4.85e-07;69!CL:0000081;7.44e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.13e-42,136;CL:0000037,1.85e-35,168;CL:0000988,2.32e-32,177;CL:0002032,1.19e-31,161;CL:0000837,1.19e-31,161;CL:0002087,4.43e-31,115;CL:0002031,2.91e-28,120;CL:0000791,1.97e-26,18;CL:0000789,1.97e-26,18;CL:0002420,1.97e-26,18;CL:0002419,1.97e-26,18;CL:0000790,1.97e-26,18;CL:0000084,3.69e-26,25;CL:0000827,3.69e-26,25;CL:0000838,3.90e-20,52;CL:0000542,1.48e-19,53;CL:0000051,1.48e-19,53;CL:0000625,3.43e-16,11;CL:0000766,9.71e-16,72;CL:0000763,2.37e-13,108;CL:0000049,2.37e-13,108;CL:0000624,1.24e-10,6;CL:0002009,3.49e-10,61;CL:0000557,3.85e-10,67;CL:0000860,3.96e-10,42;CL:0002057,3.96e-10,42;CL:0000094,4.14e-10,8;CL:0002194,6.56e-10,59;CL:0000576,6.56e-10,59;CL:0000040,6.56e-10,59;CL:0000559,6.56e-10,59;CL:0000839,1.34e-09,66;CL:0000473,4.12e-08,48;CL:0000234,4.12e-08,48;CL:0000081,6.91e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.95e-26;18!CL:0000051;3.88e-10;53!CL:0002057;1.20e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.75e-19!102;UBERON:0003061!4.75e-19!102;UBERON:0002193!1.77e-17!112;UBERON:0007023!1.38e-13!115;UBERON:0002371!1.46e-09!80;UBERON:0000178!4.94e-09!15;UBERON:0000179!4.94e-09!15;UBERON:0000463!4.94e-09!15;UBERON:0002405!2.23e-08!115;UBERON:0001474!4.25e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.71e-12;15!UBERON:0000179;4.71e-12;15!UBERON:0000463;4.71e-12;15!UBERON:0002390;2.97e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.33e-19,98;UBERON:0003061,1.33e-19,98;UBERON:0002193,1.51e-18,108;UBERON:0000178,4.73e-12,15;UBERON:0000179,4.73e-12,15;UBERON:0000463,4.73e-12,15;UBERON:0002405,6.11e-11,93;UBERON:0002371,5.17e-08,76;UBERON:0004177,1.66e-07,7;UBERON:0005057,1.66e-07,7;UBERON:0001474,6.93e-07,82;UBERON:0002370,7.15e-07,4;UBERON:0005058,7.15e-07,4;UBERON:0009113,7.15e-07,4;UBERON:0003295,7.15e-07,4;UBERON:0005562,7.15e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09982100928283,5.91124244039609,5.19491156670283,19.2748495655963,68.3216328613039,11.3015770020735,0,0,0,0,0,0,25.4837887924664,31.4854782528122,34.2877175731046,3.80656306207871,11.3362783106643,6.43938919085466,0.145398238779565,1.13362783106643,0.970336244751265,0.929716147622738,2.87817521615278,1.85823822537062,0.863077176966451,0.768482119587302,1.6553756092201,1.72372840368309,4.51839278508678,1.35426486594342,1.12945403725563,2.45615535052061,0.449446968890169,2.75475503133812,3.53021929783703,2.55734850319616,0.329851300186716,1.19678194572979,0.426224750532694,3.48251086354301,1.70215567407342,4.35975574296902,1.00499466102697,1.0429658368404,0.217188844705117,1.81619850790011,8.83866326370155,3.79754864929061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,4.11066032559657,0.382273228125229,0,106.496626966492,0,367.847270112868,218.513984088536,296.271760058293,134.417942294105,137.539196519375,124.0433251025,99.3616314880348,222.041040572151,372.381867048194,271.157486970352,390.228367685387,130.90932875964,137.342671023231,79.0946321143682,71.8510046243206,138.81567806709,114.477226761111,132.165169076318,93.0366161864293,97.1061066918142,255.22484873888,268.716662367417,340.564505458251,84.1012693815615,60.5507612086469,49.4235063113155,86.7312685887971,69.8806896903124,74.9584359314075,64.1666353039286,58.3000877813943,116.327090840671,69.5344509037119,74.8742168074071,0,0,0,0,0,0,0,0,0,0,0.702678285545008,2.35762335895883,0,0,1.29818957461873,2.43781632218974,0.531831842075461,1.66943437013739,0,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,11.6334079244498,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.0048080700524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65862492432618,0.144119953416961,2.01987893482208,0.063497894292169,0.381988425558278,1.17217447210047,0,0.205654985406647,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,47.9724416292297,80.5855809225882,101.560587758833,86.1181773437112,0,0,0,0,0,1.49801404789436,2.99161459204025,9.11714129559278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.0341350793025,58.8899768234824,62.8625315462287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16876448669825,0,0,0,0,0,0.422215270595328,0,0,0,0,1.34060455107157,0,1.03558180854457,0,0,0,0,24.8649328523763,19.1159301785594,15.9501212408766,29.302508381308,32.0862573007231,24.6419858253233,31.3218233598107,15.8625035258854,0,0,0,0,0,39.5548649017182,0.637705090915289,7.98317485731266,0,0,0,0.842391534340376,0,0,0,1.69291777801603,0,0,0,0,0,0,0,0,0,0,2.16364542780786,5.99529542396076,0,0,1.02555725490326,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,2.19172787076177,21.8264293269607,0,0,0,0,0,0,0,3.55116260292961,14.3689855408164,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,1.38510465306835,0,0,0,0,1.5950057986596,0.183195186803725,3.19820865611181,2.04386596391473,10.6746574348617,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.23840590304675,0.611030144933625,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0.394584402849391,8.46935012340647,0,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.35784623083787,0,0.451961481561065,0,0,0.126621591911757,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,14.9845791939209,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,3.89497327502609,0,0,0,0,0,2.0247650239635,0.77380195455795,0.121499113316049,0,0.945668487590378,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,0,0,6.51403216662938,2.35806457649499,6.62782488555513,24.8083010905975,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.248385611765534,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50748555910899,4.78313425128107,1.14495775979091,0,0,0,33.5978825036282,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,1.64477330057155,0.992422356778588,0.175871244359621,0,0,0,0.606965604236632,0,0.0887023701626388,20.2811818098171,0,0.0679697329768317,0,0,0,0.313972371402056,0.157115589916002,0,0,0,0,1.1436247068265,0,0,0,0,0,0,0,3.01159151174194,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0.233939463462106,0.795803100645473,0,1.6941912305844,0,0,1.85217979459067,1.5299169235277,0,0.490296643507811,0,0.392616934229891,0.891139200981258,0,0,6.01497075071063,6.89699401317276,0,0,0,0,0,4.58729283404541,0,0,0,0,5.81929524566941,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,3.19850972851471,2.3806443146374,49.7334605737247,48.045828864994,0,0.509177266225319,0.404234377916439,3.48346796635138,0,34.0127867723667,2.51027718874367,0.332660356546013,0,0,0,0,0,1.95586310692586,0,0,16.1019034872821,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09982100928283,5.91124244039609,5.19491156670283,19.2748495655963,68.3216328613039,11.3015770020735,0,0,0,0,0,0,25.4837887924664,31.4854782528122,34.2877175731046,3.80656306207871,11.3362783106643,6.43938919085466,0.145398238779565,1.13362783106643,0.970336244751265,0.929716147622738,2.87817521615278,1.85823822537062,0.863077176966451,0.768482119587302,1.6553756092201,1.72372840368309,4.51839278508678,1.35426486594342,1.12945403725563,2.45615535052061,0.449446968890169,2.75475503133812,3.53021929783703,2.55734850319616,0.329851300186716,1.19678194572979,0.426224750532694,3.48251086354301,1.70215567407342,4.35975574296902,1.00499466102697,1.0429658368404,0.217188844705117,1.81619850790011,8.83866326370155,3.79754864929061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,4.11066032559657,0.382273228125229,0,106.496626966492,0,367.847270112868,218.513984088536,296.271760058293,134.417942294105,137.539196519375,124.0433251025,99.3616314880348,222.041040572151,372.381867048194,271.157486970352,390.228367685387,130.90932875964,137.342671023231,79.0946321143682,71.8510046243206,138.81567806709,114.477226761111,132.165169076318,93.0366161864293,97.1061066918142,255.22484873888,268.716662367417,340.564505458251,84.1012693815615,60.5507612086469,49.4235063113155,86.7312685887971,69.8806896903124,74.9584359314075,64.1666353039286,58.3000877813943,116.327090840671,69.5344509037119,74.8742168074071,0,0,0,0,0,0,0,0,0,0,0.702678285545008,2.35762335895883,0,0,1.29818957461873,2.43781632218974,0.531831842075461,1.66943437013739,0,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,11.6334079244498,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.0048080700524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65862492432618,0.144119953416961,2.01987893482208,0.063497894292169,0.381988425558278,1.17217447210047,0,0.205654985406647,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,47.9724416292297,80.5855809225882,101.560587758833,86.1181773437112,0,0,0,0,0,1.49801404789436,2.99161459204025,9.11714129559278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.0341350793025,58.8899768234824,62.8625315462287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16876448669825,0,0,0,0,0,0.422215270595328,0,0,0,0,1.34060455107157,0,1.03558180854457,0,0,0,0,24.8649328523763,19.1159301785594,15.9501212408766,29.302508381308,32.0862573007231,24.6419858253233,31.3218233598107,15.8625035258854,0,0,0,0,0,39.5548649017182,0.637705090915289,7.98317485731266,0,0,0,0.842391534340376,0,0,0,1.69291777801603,0,0,0,0,0,0,0,0,0,0,2.16364542780786,5.99529542396076,0,0,1.02555725490326,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,2.19172787076177,21.8264293269607,0,0,0,0,0,0,0,3.55116260292961,14.3689855408164,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,1.38510465306835,0,0,0,0,1.5950057986596,0.183195186803725,3.19820865611181,2.04386596391473,10.6746574348617,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.23840590304675,0.611030144933625,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0.394584402849391,8.46935012340647,0,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.35784623083787,0,0.451961481561065,0,0,0.126621591911757,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,14.9845791939209,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,3.89497327502609,0,0,0,0,0,2.0247650239635,0.77380195455795,0.121499113316049,0,0.945668487590378,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,0,0,6.51403216662938,2.35806457649499,6.62782488555513,24.8083010905975,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.248385611765534,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50748555910899,4.78313425128107,1.14495775979091,0,0,0,33.5978825036282,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,1.64477330057155,0.992422356778588,0.175871244359621,0,0,0,0.606965604236632,0,0.0887023701626388,20.2811818098171,0,0.0679697329768317,0,0,0,0.313972371402056,0.157115589916002,0,0,0,0,1.1436247068265,0,0,0,0,0,0,0,3.01159151174194,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0.233939463462106,0.795803100645473,0,1.6941912305844,0,0,1.85217979459067,1.5299169235277,0,0.490296643507811,0,0.392616934229891,0.891139200981258,0,0,6.01497075071063,6.89699401317276,0,0,0,0,0,4.58729283404541,0,0,0,0,5.81929524566941,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,3.19850972851471,2.3806443146374,49.7334605737247,48.045828864994,0,0.509177266225319,0.404234377916439,3.48346796635138,0,34.0127867723667,2.51027718874367,0.332660356546013,0,0,0,0,0,1.95586310692586,0,0,16.1019034872821,0 | ||
|short_description=p1@ICOS | |||
}} | }} |
Latest revision as of 16:20, 19 September 2015
Short description: | p1@ICOS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ICOS_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -5bp_to_ENST00000435193_5end |
EntrezGene: | ICOS |
HGNC: | 5351 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.33e-19 | 98 |
blood island | 1.33e-19 | 98 |
hemolymphoid system | 1.51e-18 | 108 |
blood | 4.73e-12 | 15 |
haemolymphatic fluid | 4.73e-12 | 15 |
organism substance | 4.73e-12 | 15 |
immune system | 6.11e-11 | 93 |
bone marrow | 5.17e-08 | 76 |
hemopoietic organ | 1.66e-07 | 7 |
immune organ | 1.66e-07 | 7 |
bone element | 6.93e-07 | 82 |
thymus | 7.15e-07 | 4 |
hemolymphoid system gland | 7.15e-07 | 4 |
thymic region | 7.15e-07 | 4 |
pharyngeal gland | 7.15e-07 | 4 |
thymus primordium | 7.15e-07 | 4 |