FFCP PHASE1:Hg19::chr11:67203630..67203643,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:67203630..67203643,-
|short_description=p2@PTPRCAP
|description=CAGE_peak_2_at_PTPRCAP_5end
|association_with_transcript=178bp_to_AB527931,CR457429_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5790 | |EntrezGene=5790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9667 | |HGNC=9667 | ||
|TSSclassifier=strong | |||
|UniProt=Q14761 | |UniProt=Q14761 | ||
|association_with_transcript=178bp_to_AB527931,CR457429_5end | |||
|cluster_id=chr11:67203630..67203643,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_PTPRCAP_5end | |||
|id=chr11:67203630..67203643,- | |||
|ontology_enrichment_celltype=CL:0000542!1.97e-56!53;CL:0000051!1.97e-56!53;CL:0000838!1.87e-55!52;CL:0000037!5.47e-46!172;CL:0000566!5.47e-46!172;CL:0000988!4.78e-45!182;CL:0002032!6.19e-41!165;CL:0000837!6.19e-41!165;CL:0000738!1.48e-39!140;CL:0002087!2.36e-39!119;CL:0002031!8.23e-33!124;CL:0000084!9.08e-29!25;CL:0000827!9.08e-29!25;CL:0000945!5.10e-24!24;CL:0000826!5.10e-24!24;CL:0000791!1.89e-22!18;CL:0000789!1.89e-22!18;CL:0002420!1.89e-22!18;CL:0002419!1.89e-22!18;CL:0000790!1.89e-22!18;CL:0000236!1.41e-17!14;CL:0000625!8.63e-15!11;CL:0000624!2.22e-08!6;CL:0000134!6.32e-08!358;CL:0002320!2.43e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.29e-39;53!CL:0000084;1.21e-35;25!CL:0000791;2.71e-31;18!CL:0000789;2.71e-31;18!CL:0002419;2.71e-31;18!CL:0000945;3.90e-26;24!CL:0000625;2.58e-22;11!CL:0000236;3.51e-22;13!CL:0002087;8.70e-10;104!CL:0000624;2.48e-09;6!CL:0000898;1.03e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.11e-67,53;CL:0000051,1.11e-67,53;CL:0000838,3.67e-66,52;CL:0000037,9.15e-38,168;CL:0000084,1.46e-35,25;CL:0000827,1.46e-35,25;CL:0000988,6.54e-35,177;CL:0002032,1.54e-31,161;CL:0000837,1.54e-31,161;CL:0000791,3.08e-31,18;CL:0000789,3.08e-31,18;CL:0002420,3.08e-31,18;CL:0002419,3.08e-31,18;CL:0000790,3.08e-31,18;CL:0002087,3.22e-30,115;CL:0000738,5.02e-30,136;CL:0000945,3.53e-26,24;CL:0000826,3.53e-26,24;CL:0002031,2.25e-24,120;CL:0000236,7.11e-24,14;CL:0000625,2.59e-22,11;CL:0000624,2.54e-09,6;CL:0000134,7.95e-09,354;CL:0002320,2.37e-08,361;CL:0000898,1.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;3.29e-39;53!CL:0000790;2.71e-31;18 | |||
|ontology_enrichment_disease=DOID:2531!1.50e-15!51;DOID:0060083!1.50e-15!51;DOID:0060058!1.34e-10!10;DOID:1240!2.82e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;7.79e-11;51!DOID:0060083;7.79e-11;51!DOID:0060058;8.58e-11;10!DOID:1240;3.34e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.99e-16,51;DOID:0060083,1.99e-16,51;DOID:0060058,7.37e-11,10;DOID:1240,6.82e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.86e-13!15;UBERON:0000179!3.86e-13!15;UBERON:0000463!3.86e-13!15;UBERON:0002390!9.64e-09!102;UBERON:0003061!9.64e-09!102;UBERON:0002193!3.30e-08!112;UBERON:0004177!8.37e-08!7;UBERON:0002384!7.41e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.47e-11;15!UBERON:0000179;7.47e-11;15!UBERON:0000463;7.47e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.08e-11,15;UBERON:0000179,8.08e-11,15;UBERON:0000463,8.08e-11,15;UBERON:0002384,1.03e-07,371 | |||
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| ||
|short_description=p2@PTPRCAP | |||
}} | }} |
Latest revision as of 18:12, 19 September 2015
Short description: | p2@PTPRCAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPRCAP_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 178bp_to_AB527931, CR457429_5end |
EntrezGene: | PTPRCAP |
HGNC: | 9667 |
UniProt: | Q14761 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.11e-67 | 53 |
common lymphoid progenitor | 1.11e-67 | 53 |
lymphoid lineage restricted progenitor cell | 3.67e-66 | 52 |
hematopoietic stem cell | 9.15e-38 | 168 |
T cell | 1.46e-35 | 25 |
pro-T cell | 1.46e-35 | 25 |
hematopoietic cell | 6.54e-35 | 177 |
hematopoietic oligopotent progenitor cell | 1.54e-31 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-31 | 161 |
mature alpha-beta T cell | 3.08e-31 | 18 |
alpha-beta T cell | 3.08e-31 | 18 |
immature T cell | 3.08e-31 | 18 |
mature T cell | 3.08e-31 | 18 |
immature alpha-beta T cell | 3.08e-31 | 18 |
nongranular leukocyte | 3.22e-30 | 115 |
leukocyte | 5.02e-30 | 136 |
lymphocyte of B lineage | 3.53e-26 | 24 |
pro-B cell | 3.53e-26 | 24 |
hematopoietic lineage restricted progenitor cell | 2.25e-24 | 120 |
B cell | 7.11e-24 | 14 |
CD8-positive, alpha-beta T cell | 2.59e-22 | 11 |
CD4-positive, alpha-beta T cell | 2.54e-09 | 6 |
mesenchymal cell | 7.95e-09 | 354 |
connective tissue cell | 2.37e-08 | 361 |
naive T cell | 1.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 8.08e-11 | 15 |
haemolymphatic fluid | 8.08e-11 | 15 |
organism substance | 8.08e-11 | 15 |
connective tissue | 1.03e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.99e-16 | 51 |
immune system cancer | 1.99e-16 | 51 |
lymphoma | 7.37e-11 | 10 |
leukemia | 6.82e-10 | 39 |