FFCP PHASE1:Hg19::chr11:67204754..67204767,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:67204754..67204767,+ | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_at_chr11:67204754..67204767,+ | |description=CAGE_peak_at_chr11:67204754..67204767,+ | ||
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|ontology_enrichment_celltype=CL:0000542!2.56e-57!53;CL:0000051!2.56e-57!53;CL:0000838!2.70e-56!52;CL:0000037!1.37e-29!172;CL:0000566!1.37e-29!172;CL:0000988!1.04e-28!182;CL:0002087!6.35e-27!119;CL:0000084!8.93e-27!25;CL:0000827!8.93e-27!25;CL:0000738!1.84e-26!140;CL:0000945!3.02e-26!24;CL:0000826!3.02e-26!24;CL:0002032!4.12e-24!165;CL:0000837!4.12e-24!165;CL:0002031!1.15e-21!124;CL:0000791!5.89e-19!18;CL:0000789!5.89e-19!18;CL:0002420!5.89e-19!18;CL:0002419!5.89e-19!18;CL:0000790!5.89e-19!18;CL:0000236!2.44e-14!14;CL:0000625!8.47e-13!11;CL:0000624!6.32e-07!6 | |ontology_enrichment_celltype=CL:0000542!2.56e-57!53;CL:0000051!2.56e-57!53;CL:0000838!2.70e-56!52;CL:0000037!1.37e-29!172;CL:0000566!1.37e-29!172;CL:0000988!1.04e-28!182;CL:0002087!6.35e-27!119;CL:0000084!8.93e-27!25;CL:0000827!8.93e-27!25;CL:0000738!1.84e-26!140;CL:0000945!3.02e-26!24;CL:0000826!3.02e-26!24;CL:0002032!4.12e-24!165;CL:0000837!4.12e-24!165;CL:0002031!1.15e-21!124;CL:0000791!5.89e-19!18;CL:0000789!5.89e-19!18;CL:0002420!5.89e-19!18;CL:0002419!5.89e-19!18;CL:0000790!5.89e-19!18;CL:0000236!2.44e-14!14;CL:0000625!8.47e-13!11;CL:0000624!6.32e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.06e-31;53!CL:0000791;9.33e-25;18!CL:0000789;9.33e-25;18!CL:0002419;9.33e-25;18!CL:0000945;1.32e-24;24!CL:0000084;5.65e-23;25!CL:0000236;1.78e-17;13!CL:0000625;3.89e-16;11!CL:0000624;5.43e-12;6!CL:0000898;1.71e-09;3!CL:0002087;2.04e-07;104!CL:0000815;5.39e-07;2!CL:0000792;5.39e-07;2!CL:0002677;5.39e-07;2 | |ontology_enrichment_celltype_v019=CL:0000542;1.06e-31;53!CL:0000791;9.33e-25;18!CL:0000789;9.33e-25;18!CL:0002419;9.33e-25;18!CL:0000945;1.32e-24;24!CL:0000084;5.65e-23;25!CL:0000236;1.78e-17;13!CL:0000625;3.89e-16;11!CL:0000624;5.43e-12;6!CL:0000898;1.71e-09;3!CL:0002087;2.04e-07;104!CL:0000815;5.39e-07;2!CL:0000792;5.39e-07;2!CL:0002677;5.39e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.46e-50,52;CL:0000542,9.56e-49,53;CL:0000051,9.56e-49,53;CL:0000791,9.29e-25,18;CL:0000789,9.29e-25,18;CL:0002420,9.29e-25,18;CL:0002419,9.29e-25,18;CL:0000790,9.29e-25,18;CL:0000945,1.25e-24,24;CL:0000826,1.25e-24,24;CL:0000084,8.60e-23,25;CL:0000827,8.60e-23,25;CL:0002087,1.94e-20,115;CL:0000236,5.41e-20,14;CL:0000738,1.93e-18,136;CL:0002031,7.06e-18,120;CL:0000037,1.49e-17,168;CL:0000988,3.68e-16,177;CL:0000625,6.12e-16,11;CL:0002032,2.65e-15,161;CL:0000837,2.65e-15,161;CL:0000624,3.20e-12,6;CL:0000898,9.70e-10,3;CL:0000815,5.26e-07,2;CL:0000792,5.26e-07,2;CL:0002677,5.26e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.06e-31;53!CL:0000790;9.33e-25;18 | |ontology_enrichment_development_v019=CL:0000051;1.06e-31;53!CL:0000790;9.33e-25;18 | ||
|ontology_enrichment_disease=DOID:2531!4.76e-15!51;DOID:0060083!4.76e-15!51;DOID:0060058!3.82e-13!10;DOID:1240!8.39e-08!39 | |ontology_enrichment_disease=DOID:2531!4.76e-15!51;DOID:0060083!4.76e-15!51;DOID:0060058!3.82e-13!10;DOID:1240!8.39e-08!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.24e-12!15;UBERON:0000179!3.24e-12!15;UBERON:0000463!3.24e-12!15;UBERON:0004177!1.12e-09!7 | |ontology_enrichment_uberon=UBERON:0000178!3.24e-12!15;UBERON:0000179!3.24e-12!15;UBERON:0000463!3.24e-12!15;UBERON:0004177!1.12e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.86e-07;2!UBERON:0005058;3.86e-07;2!UBERON:0009113;3.86e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;3.86e-07;2!UBERON:0005058;3.86e-07;2!UBERON:0009113;3.86e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.33e-07,4;UBERON:0005058,2.33e-07,4;UBERON:0009113,2.33e-07,4;UBERON:0003295,2.33e-07,4;UBERON:0005562,2.33e-07,4 | |||
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|short_description=p@chr11:67204754..67204767,+ | |short_description=p@chr11:67204754..67204767,+ | ||
}} | }} |
Latest revision as of 18:13, 19 September 2015
Short description: | p@chr11:67204754..67204767, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:67204754..67204767, + |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.46e-50 | 52 |
lymphocyte | 9.56e-49 | 53 |
common lymphoid progenitor | 9.56e-49 | 53 |
mature alpha-beta T cell | 9.29e-25 | 18 |
alpha-beta T cell | 9.29e-25 | 18 |
immature T cell | 9.29e-25 | 18 |
mature T cell | 9.29e-25 | 18 |
immature alpha-beta T cell | 9.29e-25 | 18 |
lymphocyte of B lineage | 1.25e-24 | 24 |
pro-B cell | 1.25e-24 | 24 |
T cell | 8.60e-23 | 25 |
pro-T cell | 8.60e-23 | 25 |
nongranular leukocyte | 1.94e-20 | 115 |
B cell | 5.41e-20 | 14 |
leukocyte | 1.93e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 7.06e-18 | 120 |
hematopoietic stem cell | 1.49e-17 | 168 |
hematopoietic cell | 3.68e-16 | 177 |
CD8-positive, alpha-beta T cell | 6.12e-16 | 11 |
hematopoietic oligopotent progenitor cell | 2.65e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.65e-15 | 161 |
CD4-positive, alpha-beta T cell | 3.20e-12 | 6 |
naive T cell | 9.70e-10 | 3 |
regulatory T cell | 5.26e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.26e-07 | 2 |
naive regulatory T cell | 5.26e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.33e-07 | 4 |
hemolymphoid system gland | 2.33e-07 | 4 |
thymic region | 2.33e-07 | 4 |
pharyngeal gland | 2.33e-07 | 4 |
thymus primordium | 2.33e-07 | 4 |