FFCP PHASE1:Hg19::chr6:74405789..74405800,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:74405789..74405800,+
|short_description=p6@CD109
|description=CAGE_peak_6_at_CD109_5end
|association_with_transcript=-26bp_to_ENST00000287097_5end
|Entrez...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=135228 | |EntrezGene=135228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21685 | |HGNC=21685 | ||
|TSSclassifier=strong | |||
|UniProt=Q6YHK3 | |UniProt=Q6YHK3 | ||
|association_with_transcript=-26bp_to_ENST00000287097_5end | |||
|cluster_id=chr6:74405789..74405800,+ | |||
|coexpression_cluster_id=C1979 | |||
|description=CAGE_peak_6_at_CD109_5end | |||
|id=chr6:74405789..74405800,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.74e-18!180;CL:0000057!8.41e-14!75;CL:0002620!7.89e-12!23;CL:0002371!3.26e-08!591;CL:0000012!5.78e-07!682;CL:0000144!6.36e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.48e-13;23!CL:0000349;9.70e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.31e-14,76;CL:0002620,1.72e-13,23;CL:0000048,1.33e-08,427;CL:0000723,1.38e-08,433;CL:0000034,5.68e-08,441;CL:0002320,7.42e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.61e-10!95;UBERON:0002097!3.71e-09!40;UBERON:0002199!3.75e-09!45;UBERON:0002416!3.75e-09!45;UBERON:0000468!4.11e-09!659;UBERON:0000914!1.34e-07!83;UBERON:0002329!1.34e-07!83;UBERON:0003077!1.34e-07!83;UBERON:0003059!1.34e-07!83;UBERON:0007282!1.34e-07!83;UBERON:0009618!1.34e-07!83;UBERON:0007285!1.34e-07!83;UBERON:0000467!1.84e-07!625;UBERON:0000480!2.92e-07!626;UBERON:0000926!2.96e-07!448;UBERON:0004120!2.96e-07!448;UBERON:0006603!2.96e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.61e-08;41!UBERON:0002199;1.01e-07;46!UBERON:0002416;1.01e-07;46!UBERON:0001434;1.09e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.37e-12,99;UBERON:0002097,2.04e-11,41;UBERON:0002199,2.64e-11,46;UBERON:0002416,2.64e-11,46;UBERON:0004923,4.20e-07,66;UBERON:0000926,9.43e-07,315;UBERON:0004120,9.43e-07,315;UBERON:0006603,9.43e-07,315 | |||
|phase1_expression=2.18014055124668,0.856402095563933,1.9733616573436,5.00366491765652,1.34088328328186,0,0,2.52687949370732,0.783556884599516,0.491467873003018,0,4.80571018686379,2.37390280405608,4.20805600064159,2.31978163009541,1.34465029290355,3.01347264011988,3.65155045193687,1.95173119516203,0.492484232307152,0.204000691244253,0.626909442956176,0.286235987131057,0.410623275218653,0.251085279189606,0.0764134057479513,0,0,0,0,0.464448369948228,0,0.30120591877825,2.21852406100073,0,0,1.76160263600908,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0.290796477559129,1.88937971844405,0.727752183563449,0.464858073811369,3.70051099219643,2.47765096716083,1.43846196161075,4.35473201099471,2.36482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,1.91034305040492,1.57306439111559,1.22433556948361,3.53021929783703,0.639337125799041,0,2.19410023383795,1.27867425159808,0.290209238628584,0,0,2.00998932205395,4.17186334736161,3.47502151528187,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,1.00269411196656,0,0,0,0.25618263945135,0.390178042679635,0.328875809207352,0.276350017785848,0.869409257205157,0.14828656316206,0,0,0.566546713487831,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,0.255725123687061,3.2529523714611,3.50936537445123,2.31754430337318,5.5670016293577,1.94653948121054,0.756278537312543,0.886917589850256,0.614843499851882,0.523916301990851,0,0,0,0.870648686496336,0.398873881556595,1.43094374583205,0.571994910780128,1.48583000531826,0.79504962946682,2.58070378531837,1.04142150482278,0.56530794192401,0,0.550236083880135,0.208994966536811,1.29208379584664,5.33649394030065,4.01664735317604,0,2.28081631715554,0.488124115096339,3.30896772311282,1.62028389576352,3.75058858793135,2.46982309888787,2.59006405111641,1.53316637465883,0.949265659568129,2.5648244150257,0,0,1.3082821564276,0.993943903390637,1.51956613997496,2.78059279707759,7.45775213946916,1.41867352879343,0.560677600142307,1.06748995729705,0.24666754841716,2.8008993185979,2.15537075311501,0.980771418680752,0.908144565869588,2.30470369792,1.64025002283658,3.1216007683032,3.4228309292667,2.39117888882882,4.46251094846307,4.69431538667581,3.51127016755621,2.24569588380383,1.96534907698829,3.61640234115179,1.18800285728205,1.48360157567134,0,0,3.70339450698946,1.25118519871964,2.21651292387346,3.95079858792754,3.37136575378922,3.45547535485173,0.567160915800105,10.5839885056429,3.84403299873421,1.90738711043606,11.7035527472917,4.84346887420663,9.53269998168828,3.53622027030021,11.9831195891299,3.50773218580315,11.6119536152293,4.51044503347267,2.7479829659198,19.1705179958972,3.72782763442269,1.86516651541536,3.47869535693934,1.90922284413584,2.29443676311203,0.609868530647977,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,1.92972281457866,5.52539685409922,2.3218396401599,3.60939740834793,1.77460200059766,0.505754070234305,0.723033089650446,0.992645754591546,0.435758888184812,1.66089433377768,1.61797569792197,1.17732879075208,1.53898862778556,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,1.02940686179115,2.52425656439839,0,0.301586917234893,2.68506490959736,0.325808305310325,2.07986957055916,0,0.34779121492523,2.58299127318808,0.577465791044295,0.462985512576611,1.33177906564219,0.790204397959275,0.858486162094873,0.984868024349589,0.468008530278475,1.33768046059855,0,2.85569617938061,2.55195175036296,1.88072897675981,3.48760726216754,1.15014803749563,0.492663237895943,0.528290604079356,0.829312462163088,0.432359860250884,0.88369703398466,2.79390734885544,4.58386110669933,2.34434894420094,0,1.23392991243988,1.8020583470635,2.28661146104463,1.45770409648969,0,1.0267360014933,1.03417372606222,3.57656445851882,0.845302752556,2.39344304926383,1.04007436911366,1.28603687131071,4.25547396069835,0.532844358032199,0,1.08524321078289,0,0.65147236858747,0.355391948742546,2.37585561880029,0,1.74306691720059,0.699810938274399,2.43247561282381,1.50677127429638,0,2.15662369942424,3.44585807502342,1.42636905040718,2.02693829334611,1.84928690295345,1.43248770591916,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,2.94459580125936,3.50119364741774,2.71265023699736,0.831883446123229,0.535286966391485,0.788512075169673,0.585707074963566,1.50473049863859,2.27407504055985,1.03473071292505,3.32112799267718,2.21243002250044,5.73431855489347,0.195801157462741,0.686286847621712,0,0.215714200818617,0,0.909382714338778,3.32870879020994,2.11673205330776,2.23297027036899,5.06424511850606,1.40330047216537,0.640695746278505,3.07024349440022,0.482561763430822,0,1.3878872442239,2.30830242907065,3.77784917663522,3.11552657510173,2.67283870457906,0,2.40607764363942,1.28913384510255,0.68888668898764,1.45672934405374,1.18011973463482,0,0.0770153371044148,1.56869953835371,1.46139224653261,0.844413031143006,2.27466768141793,1.02056223165909,3.88648648983851,1.54227252690289,0.812839312631559,1.00337954770971,0.2548762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| ||
|short_description=p6@CD109 | |||
}} | }} |
Latest revision as of 18:29, 19 September 2015
Short description: | p6@CD109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD109_5end |
Coexpression cluster: | C1979_Fibroblast_salivary_CD14_immature_amniotic_Melanocyte_Smooth |
Association with transcript: | -26bp_to_ENST00000287097_5end |
EntrezGene: | CD109 |
HGNC: | 21685 |
UniProt: | Q6YHK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.31e-14 | 76 |
skin fibroblast | 1.72e-13 | 23 |
multi fate stem cell | 1.33e-08 | 427 |
somatic stem cell | 1.38e-08 | 433 |
stem cell | 5.68e-08 | 441 |
connective tissue cell | 7.42e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.37e-12 | 99 |
skin of body | 2.04e-11 | 41 |
integument | 2.64e-11 | 46 |
integumental system | 2.64e-11 | 46 |
organ component layer | 4.20e-07 | 66 |
mesoderm | 9.43e-07 | 315 |
mesoderm-derived structure | 9.43e-07 | 315 |
presumptive mesoderm | 9.43e-07 | 315 |