FFCP PHASE1:Hg19::chr11:68816356..68816464,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=219931 | |EntrezGene=219931 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20820 | |HGNC=20820 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NHX9,F5H1G5,F5H0P6,E7ETX0 | |UniProt=Q8NHX9,F5H1G5,F5H0P6,E7ETX0 | ||
|association_with_transcript=0bp_to_ENST00000294309,ENST00000535009,ENST00000539166,ENST00000542467_5end | |||
|cluster_id=chr11:68816356..68816464,+ | |||
|coexpression_cluster_id=C806 | |||
|description=CAGE_peak_1_at_TPCN2_5end | |||
|id=chr11:68816356..68816464,+ | |||
|ontology_enrichment_celltype=CL:0000766!9.86e-31!76;CL:0000557!1.71e-26!71;CL:0002194!3.73e-26!63;CL:0000576!3.73e-26!63;CL:0000040!3.73e-26!63;CL:0000559!3.73e-26!63;CL:0002057!9.05e-26!42;CL:0000839!1.81e-25!70;CL:0002009!2.72e-25!65;CL:0000860!2.36e-24!45;CL:0000763!2.04e-22!112;CL:0000049!2.04e-22!112;CL:0000738!4.94e-17!140;CL:0000037!1.13e-15!172;CL:0000566!1.13e-15!172;CL:0000988!1.56e-15!182;CL:0002032!4.10e-14!165;CL:0000837!4.10e-14!165;CL:0002087!5.80e-14!119;CL:0002031!1.46e-13!124;CL:0002393!9.41e-07!9;CL:0002397!9.41e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.17e-19;33!CL:0002057;8.17e-19;33!CL:0000473;1.84e-18;39!CL:0000234;1.84e-18;39!CL:0000576;1.09e-16;48!CL:0000766;1.66e-14;69!CL:0000763;2.44e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.93e-32,72;CL:0000473,6.56e-29,48;CL:0000234,6.56e-29,48;CL:0000557,4.43e-28,67;CL:0002194,6.28e-28,59;CL:0000576,6.28e-28,59;CL:0000040,6.28e-28,59;CL:0000559,6.28e-28,59;CL:0000839,5.11e-27,66;CL:0002009,5.92e-27,61;CL:0000860,9.05e-26,42;CL:0002057,9.05e-26,42;CL:0000763,2.95e-23,108;CL:0000049,2.95e-23,108;CL:0000738,1.51e-17,136;CL:0000037,4.68e-16,168;CL:0000988,5.20e-16,177;CL:0002032,1.77e-14,161;CL:0000837,1.77e-14,161;CL:0002087,1.82e-14,115;CL:0002031,4.96e-14,120;CL:0002393,9.41e-07,9;CL:0002397,9.41e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.87e-19;42!CL:0000049;1.70e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.24e-23!102;UBERON:0003061!1.24e-23!102;UBERON:0002371!1.29e-21!80;UBERON:0001474!3.58e-21!86;UBERON:0002193!4.30e-21!112;UBERON:0002405!3.43e-15!115;UBERON:0004765!3.76e-15!101;UBERON:0001434!3.76e-15!101;UBERON:0007023!8.04e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.31e-24,98;UBERON:0003061,1.31e-24,98;UBERON:0002371,9.15e-23,76;UBERON:0001474,3.22e-22,82;UBERON:0002193,6.91e-22,108;UBERON:0002405,8.01e-20,93;UBERON:0004765,1.36e-18,90;UBERON:0001434,2.74e-15,100;UBERON:0007023,7.60e-08,114;UBERON:0003081,1.85e-07,203 | |||
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| ||
|short_description=p1@TPCN2 | |||
}} | }} |
Latest revision as of 20:49, 19 September 2015
Short description: | p1@TPCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPCN2_5end |
Coexpression cluster: | C806_Melanocyte_CD14_Monocytederived_Macrophage_granulocyte_Mast_Eosinophils |
Association with transcript: | 0bp_to_ENST00000294309, ENST00000535009, ENST00000539166, ENST00000542467_5end |
EntrezGene: | TPCN2 |
HGNC: | 20820 |
UniProt: | Q8NHX9F5H1G5F5H0P6E7ETX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.93e-32 | 72 |
defensive cell | 6.56e-29 | 48 |
phagocyte | 6.56e-29 | 48 |
granulocyte monocyte progenitor cell | 4.43e-28 | 67 |
monopoietic cell | 6.28e-28 | 59 |
monocyte | 6.28e-28 | 59 |
monoblast | 6.28e-28 | 59 |
promonocyte | 6.28e-28 | 59 |
myeloid lineage restricted progenitor cell | 5.11e-27 | 66 |
macrophage dendritic cell progenitor | 5.92e-27 | 61 |
classical monocyte | 9.05e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.05e-26 | 42 |
myeloid cell | 2.95e-23 | 108 |
common myeloid progenitor | 2.95e-23 | 108 |
leukocyte | 1.51e-17 | 136 |
hematopoietic stem cell | 4.68e-16 | 168 |
hematopoietic cell | 5.20e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.77e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-14 | 161 |
nongranular leukocyte | 1.82e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 4.96e-14 | 120 |
intermediate monocyte | 9.41e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.41e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.31e-24 | 98 |
blood island | 1.31e-24 | 98 |
bone marrow | 9.15e-23 | 76 |
bone element | 3.22e-22 | 82 |
hemolymphoid system | 6.91e-22 | 108 |
immune system | 8.01e-20 | 93 |
skeletal element | 1.36e-18 | 90 |
skeletal system | 2.74e-15 | 100 |
adult organism | 7.60e-08 | 114 |
lateral plate mesoderm | 1.85e-07 | 203 |