FFCP PHASE1:Hg19::chr11:69061636..69061648,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:69061636..69061648,+
|short_description=p3@MYEOV
|description=CAGE_peak_3_at_MYEOV_5end
|association_with_transcript=0bp_to_ENST00000540760_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26579 | |EntrezGene=26579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7563 | |HGNC=7563 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000540760_5end | |||
|cluster_id=chr11:69061636..69061648,+ | |||
|coexpression_cluster_id=C2158 | |||
|description=CAGE_peak_3_at_MYEOV_5end | |||
|id=chr11:69061636..69061648,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.36e-16!254 | |||
|ontology_enrichment_celltype_v019=CL:1000497;6.11e-09;17!CL:0002518;6.11e-09;17!CL:1000507;1.02e-08;10!CL:1000494;1.02e-08;10!CL:0000239;3.47e-08;3!CL:1000615;3.47e-08;3!CL:0002306;3.47e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.07e-15,253;CL:1000497,5.19e-09,17;CL:0002518,5.19e-09,17;CL:1000507,8.14e-09,10;CL:1000494,8.14e-09,10;CL:0000239,3.09e-08,3;CL:1000615,3.09e-08,3;CL:0002306,3.09e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.04e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!1.66e-21!143;DOID:305!2.00e-21!106;DOID:1749!7.26e-14!14;DOID:162!5.24e-13!235;DOID:14566!2.82e-12!239;DOID:299!2.90e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:299;5.79e-16;25!DOID:1749;5.63e-15;14!DOID:3908;1.62e-09;5!DOID:1324;1.61e-08;15!DOID:0050615;6.42e-08;16!DOID:4929;2.14e-07;2!DOID:0050687;2.25e-07;143!DOID:3910;7.72e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.35e-28,106;DOID:0050687,5.10e-27,143;DOID:162,2.01e-18,235;DOID:14566,8.90e-18,239;DOID:299,4.98e-16,25;DOID:1749,5.99e-15,14;DOID:3908,1.62e-09,5;DOID:1324,1.72e-08,15;DOID:0050615,6.84e-08,16;DOID:4929,2.21e-07,2;DOID:3910,7.41e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.27e-10!169;UBERON:0000925!5.27e-10!169;UBERON:0006595!5.27e-10!169;UBERON:0001007!2.12e-09!155;UBERON:0001555!2.12e-09!155;UBERON:0007026!2.12e-09!155;UBERON:0000077!2.17e-07!130;UBERON:0005177!3.45e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;2.87e-10;7!UBERON:0001173;2.87e-10;7!UBERON:0001264;4.36e-10;10!UBERON:0002075;7.10e-09;18!UBERON:0004211;1.02e-08;10!UBERON:0009773;1.02e-08;10!UBERON:0001231;1.02e-08;10!UBERON:0004810;1.02e-08;10!UBERON:0006853;3.47e-08;3!UBERON:0007685;3.47e-08;3!UBERON:0004134;3.47e-08;3!UBERON:0002394;1.25e-07;4!UBERON:0003928;1.25e-07;4!UBERON:0000058;2.20e-07;10!UBERON:0002346;2.89e-07;4!UBERON:0000923;2.89e-07;4!UBERON:0010316;2.89e-07;4!UBERON:0005291;2.89e-07;4!UBERON:0004903;7.72e-07;2!UBERON:0002173;7.72e-07;2!UBERON:0002186;7.72e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,8.55e-11,9;UBERON:0001173,8.55e-11,9;UBERON:0004912,8.55e-11,9;UBERON:0005177,1.02e-10,101;UBERON:0001264,3.26e-10,10;UBERON:0002075,6.35e-09,18;UBERON:0004810,8.14e-09,10;UBERON:0006853,3.09e-08,3;UBERON:0007685,3.09e-08,3;UBERON:0004134,3.09e-08,3;UBERON:0002394,4.17e-08,6;UBERON:0003928,4.17e-08,6;UBERON:0005911,1.73e-07,82;UBERON:0004903,7.41e-07,2;UBERON:0002173,7.41e-07,2;UBERON:0002186,7.41e-07,2 | |||
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| ||
|short_description=p3@MYEOV | |||
}} | }} |
Latest revision as of 21:06, 19 September 2015
Short description: | p3@MYEOV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYEOV_5end |
Coexpression cluster: | C2158_peripheral_renal_neuroblastoma_tubular_squamous_neuroectodermal_epidermoid |
Association with transcript: | 0bp_to_ENST00000540760_5end |
EntrezGene: | MYEOV |
HGNC: | 7563 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.07e-15 | 253 |
kidney cell | 5.19e-09 | 17 |
kidney epithelial cell | 5.19e-09 | 17 |
kidney tubule cell | 8.14e-09 | 10 |
nephron tubule epithelial cell | 8.14e-09 | 10 |
brush border epithelial cell | 3.09e-08 | 3 |
kidney cortex tubule cell | 3.09e-08 | 3 |
epithelial cell of proximal tubule | 3.09e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
biliary system | 8.55e-11 | 9 |
biliary tree | 8.55e-11 | 9 |
biliary bud | 8.55e-11 | 9 |
trunk region element | 1.02e-10 | 101 |
pancreas | 3.26e-10 | 10 |
viscus | 6.35e-09 | 18 |
nephron tubule epithelium | 8.14e-09 | 10 |
renal cortex tubule | 3.09e-08 | 3 |
region of nephron tubule | 3.09e-08 | 3 |
proximal tubule | 3.09e-08 | 3 |
bile duct | 4.17e-08 | 6 |
digestive system duct | 4.17e-08 | 6 |
endo-epithelium | 1.73e-07 | 82 |
bronchoalveolar duct junction | 7.41e-07 | 2 |
alveolar duct | 7.41e-07 | 2 |
bronchiole | 7.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.35e-28 | 106 |
cell type cancer | 5.10e-27 | 143 |
cancer | 2.01e-18 | 235 |
disease of cellular proliferation | 8.90e-18 | 239 |
adenocarcinoma | 4.98e-16 | 25 |
squamous cell carcinoma | 5.99e-15 | 14 |
non-small cell lung carcinoma | 1.62e-09 | 5 |
lung cancer | 1.72e-08 | 15 |
respiratory system cancer | 6.84e-08 | 16 |
tubular adenocarcinoma | 2.21e-07 | 2 |
lung adenocarcinoma | 7.41e-07 | 2 |