FFCP PHASE1:Hg19::chr3:119379740..119379743,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64091 | |EntrezGene=64091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17648 | |HGNC=17648 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3P7 | |UniProt=C9J3P7 | ||
|association_with_transcript=-10bp_to_ENST00000493094_5end | |association_with_transcript=-10bp_to_ENST00000493094_5end | ||
|cluster_id=chr3:119379740..119379743,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_5_at_POPDC2_5end | |description=CAGE_peak_5_at_POPDC2_5end | ||
|id=chr3:119379740..119379743,- | |id=chr3:119379740..119379743,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;8.10e-41;1!UBERON:0010227;2.70e-40;1!UBERON:0005062;3.60e-11;4!UBERON:0007284;3.60e-11;4!UBERON:0004872;5.23e-07;7 | |||
|ontology_enrichment_disease=DOID:114!1.73e-16!2;DOID:178!4.89e-09!1;DOID:326!4.89e-09!1;DOID:3978!4.89e-09!1;DOID:3394!4.89e-09!1;DOID:5844!4.89e-09!1;DOID:1287!1.09e-08!4 | |ontology_enrichment_disease=DOID:114!1.73e-16!2;DOID:178!4.89e-09!1;DOID:326!4.89e-09!1;DOID:3978!4.89e-09!1;DOID:3394!4.89e-09!1;DOID:5844!4.89e-09!1;DOID:1287!1.09e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:114;4.66e-21;2!DOID:1287;3.10e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.66e-21,2;DOID:1287,3.10e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0006947!5.64e-23!3;UBERON:0004054!5.64e-23!3;UBERON:0007023!9.99e-20!115;UBERON:0005904!2.17e-17!4;UBERON:0000341!1.43e-15!2;UBERON:0007100!3.22e-13!27;UBERON:0003103!2.03e-11!69;UBERON:0003978!4.21e-11!3;UBERON:0009751!4.21e-11!3;UBERON:0000946!4.21e-11!3;UBERON:0002523!4.21e-11!3;UBERON:0005983!4.21e-11!3;UBERON:0002165!4.21e-11!3;UBERON:0002062!4.21e-11!3;UBERON:0007280!4.21e-11!3;UBERON:0002079!3.87e-09!1;UBERON:0002146!4.19e-09!1;UBERON:0005623!4.19e-09!1;UBERON:0001000!5.28e-09!1;UBERON:0005352!5.28e-09!1;UBERON:0007029!6.16e-09!1;UBERON:0000998!6.65e-09!1;UBERON:0006868!6.65e-09!1;UBERON:0002135!8.36e-09!1;UBERON:0001301!1.53e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.70e-40;1!UBERON:0002146;2.70e-40;1!UBERON:0005623;2.70e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0002081;6.30e-21;2!UBERON:0000948;5.88e-17;22!UBERON:0003978;1.96e-14;3!UBERON:0004151;1.96e-14;3!UBERON:0000946;1.96e-14;3!UBERON:0003103;6.10e-12;61!UBERON:0001009;5.23e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.21e-40,1;UBERON:0002146,3.30e-40,1;UBERON:0005623,3.30e-40,1;UBERON:0007100,4.92e-37,27;UBERON:0002081,5.70e-21,2;UBERON:0010227,5.70e-21,2;UBERON:0000948,1.25e-15,24;UBERON:0005498,1.25e-15,24;UBERON:0004140,1.25e-15,24;UBERON:0009881,1.25e-15,24;UBERON:0004141,1.25e-15,24;UBERON:0003084,1.25e-15,24;UBERON:0007005,1.25e-15,24;UBERON:0004139,1.25e-15,24;UBERON:0004291,1.25e-15,24;UBERON:0003103,3.48e-15,68;UBERON:0004151,1.83e-14,3;UBERON:0003978,2.09e-14,3;UBERON:0009751,2.09e-14,3;UBERON:0000946,2.09e-14,3;UBERON:0002523,2.09e-14,3;UBERON:0005983,2.09e-14,3;UBERON:0002165,2.09e-14,3;UBERON:0002062,2.09e-14,3;UBERON:0007280,2.09e-14,3;UBERON:0001009,1.80e-09,112;UBERON:0004797,6.39e-07,7 | |||
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|short_description=p5@POPDC2 | |short_description=p5@POPDC2 | ||
}} | }} |
Latest revision as of 21:07, 19 September 2015
Short description: | p5@POPDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_POPDC2_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -10bp_to_ENST00000493094_5end |
EntrezGene: | POPDC2 |
HGNC: | 17648 |
UniProt: | C9J3P7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.21e-40 | 1 |
pulmonary valve | 3.30e-40 | 1 |
semi-lunar valve | 3.30e-40 | 1 |
primary circulatory organ | 4.92e-37 | 27 |
cardiac atrium | 5.70e-21 | 2 |
future cardiac atrium | 5.70e-21 | 2 |
heart | 1.25e-15 | 24 |
primitive heart tube | 1.25e-15 | 24 |
primary heart field | 1.25e-15 | 24 |
anterior lateral plate mesoderm | 1.25e-15 | 24 |
heart tube | 1.25e-15 | 24 |
heart primordium | 1.25e-15 | 24 |
cardiac mesoderm | 1.25e-15 | 24 |
cardiogenic plate | 1.25e-15 | 24 |
heart rudiment | 1.25e-15 | 24 |
compound organ | 3.48e-15 | 68 |
cardiac chamber | 1.83e-14 | 3 |
valve | 2.09e-14 | 3 |
cardiac mesenchyme | 2.09e-14 | 3 |
cardial valve | 2.09e-14 | 3 |
tunica intima | 2.09e-14 | 3 |
heart layer | 2.09e-14 | 3 |
endocardium | 2.09e-14 | 3 |
endocardial cushion | 2.09e-14 | 3 |
presumptive endocardium | 2.09e-14 | 3 |
circulatory system | 1.80e-09 | 112 |
blood vessel layer | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.66e-21 | 2 |
cardiovascular system disease | 3.10e-11 | 4 |