FFCP PHASE1:Hg19::chr5:118728908..118728920,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25816 | |EntrezGene=25816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17260 | |HGNC=17260 | ||
|TSSclassifier=strong | |||
|UniProt=O95379 | |UniProt=O95379 | ||
|association_with_transcript=135bp_to_AF098933_5end | |association_with_transcript=135bp_to_AF098933_5end | ||
|cluster_id=chr5:118728908..118728920,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_23_at_TNFAIP8_5end | |description=CAGE_peak_23_at_TNFAIP8_5end | ||
|id=chr5:118728908..118728920,+ | |id=chr5:118728908..118728920,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.75e-36!42;CL:0000860!1.03e-32!45;CL:0002009!3.55e-29!65;CL:0002194!1.33e-28!63;CL:0000576!1.33e-28!63;CL:0000040!1.33e-28!63;CL:0000559!1.33e-28!63;CL:0002087!1.74e-28!119;CL:0000557!3.08e-27!71;CL:0000037!4.07e-27!172;CL:0000566!4.07e-27!172;CL:0000988!1.24e-26!182;CL:0000738!1.55e-26!140;CL:0000839!4.19e-26!70;CL:0002032!1.50e-25!165;CL:0000837!1.50e-25!165;CL:0000766!8.74e-25!76;CL:0000763!1.41e-24!112;CL:0000049!1.41e-24!112;CL:0002031!4.18e-24!124;CL:0000134!3.42e-11!358;CL:0002320!1.31e-10!365;CL:0000219!1.71e-09!390;CL:0000048!1.80e-07!430;CL:0000723!4.09e-07!436;CL:0000080!9.54e-07!6 | |ontology_enrichment_celltype=CL:0002057!8.75e-36!42;CL:0000860!1.03e-32!45;CL:0002009!3.55e-29!65;CL:0002194!1.33e-28!63;CL:0000576!1.33e-28!63;CL:0000040!1.33e-28!63;CL:0000559!1.33e-28!63;CL:0002087!1.74e-28!119;CL:0000557!3.08e-27!71;CL:0000037!4.07e-27!172;CL:0000566!4.07e-27!172;CL:0000988!1.24e-26!182;CL:0000738!1.55e-26!140;CL:0000839!4.19e-26!70;CL:0002032!1.50e-25!165;CL:0000837!1.50e-25!165;CL:0000766!8.74e-25!76;CL:0000763!1.41e-24!112;CL:0000049!1.41e-24!112;CL:0002031!4.18e-24!124;CL:0000134!3.42e-11!358;CL:0002320!1.31e-10!365;CL:0000219!1.71e-09!390;CL:0000048!1.80e-07!430;CL:0000723!4.09e-07!436;CL:0000080!9.54e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.14e-62;33!CL:0002057;2.14e-62;33!CL:0000473;5.48e-47;39!CL:0000234;5.48e-47;39!CL:0000576;3.08e-28;48!CL:0000766;9.28e-17;69!CL:0000763;1.09e-11;100!CL:0002087;6.16e-11;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.85e-53,48;CL:0000234,4.85e-53,48;CL:0000860,7.27e-53,42;CL:0002057,7.27e-53,42;CL:0002194,4.20e-42,59;CL:0000576,4.20e-42,59;CL:0000040,4.20e-42,59;CL:0000559,4.20e-42,59;CL:0002009,1.09e-40,61;CL:0000839,1.58e-37,66;CL:0000557,5.97e-37,67;CL:0000766,2.66e-34,72;CL:0000763,2.19e-22,108;CL:0000049,2.19e-22,108;CL:0002087,6.36e-21,115;CL:0002031,5.55e-20,120;CL:0000738,1.98e-17,136;CL:0002032,1.92e-14,161;CL:0000837,1.92e-14,161;CL:0000037,9.16e-14,168;CL:0000988,5.72e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-35;42!CL:0000049;9.67e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.13e-23!102;UBERON:0003061!1.13e-23!102;UBERON:0002371!6.77e-23!80;UBERON:0002193!1.11e-21!112;UBERON:0001474!1.62e-20!86;UBERON:0002405!1.49e-16!115;UBERON:0004765!7.62e-16!101;UBERON:0001434!7.62e-16!101;UBERON:0002384!8.10e-10!375;UBERON:0003081!2.40e-07!216;UBERON:0002204!2.51e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.98e-32,76;UBERON:0001474,5.85e-30,82;UBERON:0004765,3.60e-27,90;UBERON:0002405,3.02e-26,93;UBERON:0002390,7.88e-25,98;UBERON:0003061,7.88e-25,98;UBERON:0001434,2.66e-24,100;UBERON:0002193,2.19e-22,108;UBERON:0002204,7.39e-14,167;UBERON:0003081,4.62e-11,203 | |||
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| ||
|short_description=p23@TNFAIP8 | |short_description=p23@TNFAIP8 | ||
}} | }} |
Latest revision as of 21:55, 19 September 2015
Short description: | p23@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_TNFAIP8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 135bp_to_AF098933_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | O95379 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.85e-53 | 48 |
phagocyte | 4.85e-53 | 48 |
classical monocyte | 7.27e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.27e-53 | 42 |
monopoietic cell | 4.20e-42 | 59 |
monocyte | 4.20e-42 | 59 |
monoblast | 4.20e-42 | 59 |
promonocyte | 4.20e-42 | 59 |
macrophage dendritic cell progenitor | 1.09e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.58e-37 | 66 |
granulocyte monocyte progenitor cell | 5.97e-37 | 67 |
myeloid leukocyte | 2.66e-34 | 72 |
myeloid cell | 2.19e-22 | 108 |
common myeloid progenitor | 2.19e-22 | 108 |
nongranular leukocyte | 6.36e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 5.55e-20 | 120 |
leukocyte | 1.98e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.92e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-14 | 161 |
hematopoietic stem cell | 9.16e-14 | 168 |
hematopoietic cell | 5.72e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.98e-32 | 76 |
bone element | 5.85e-30 | 82 |
skeletal element | 3.60e-27 | 90 |
immune system | 3.02e-26 | 93 |
hematopoietic system | 7.88e-25 | 98 |
blood island | 7.88e-25 | 98 |
skeletal system | 2.66e-24 | 100 |
hemolymphoid system | 2.19e-22 | 108 |
musculoskeletal system | 7.39e-14 | 167 |
lateral plate mesoderm | 4.62e-11 | 203 |