FFCP PHASE1:Hg19::chr10:91461337..91461380,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:91461337..91461380,+ to FFCP PHASE1:Hg19::chr10:91461337..91461380,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9585 | |EntrezGene=9585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7212 | |HGNC=7212 | ||
|TSSclassifier=strong | |||
|UniProt=Q96Q89,C9J6W2 | |UniProt=Q96Q89,C9J6W2 | ||
|association_with_transcript=0bp_to_ENST00000260753,ENST00000371728,ENST00000394289,ENST00000416354,NM_016195,uc001kgr.1,uc001kgs.1_5end | |||
|cluster_id=chr10:91461337..91461380,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_KIF20B_5end | |||
|id=chr10:91461337..91461380,+ | |||
|ontology_enrichment_celltype=CL:0000542!5.98e-18!53;CL:0000051!5.98e-18!53;CL:0000838!2.27e-17!52;CL:0000037!2.37e-14!172;CL:0000566!2.37e-14!172;CL:0000988!1.22e-12!182;CL:0002032!1.61e-12!165;CL:0000837!1.61e-12!165;CL:0000945!4.86e-09!24;CL:0000826!4.86e-09!24;CL:0000084!4.55e-08!25;CL:0000827!4.55e-08!25;CL:0000738!3.16e-07!140;CL:0002031!4.08e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000542;7.09e-11;53!CL:0000945;4.37e-09;24!CL:0000084;4.26e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.71e-18,53;CL:0000051,5.71e-18,53;CL:0000838,2.17e-17,52;CL:0000037,1.74e-13,168;CL:0000988,3.11e-12,177;CL:0002032,1.07e-11,161;CL:0000837,1.07e-11,161;CL:0000945,4.76e-09,24;CL:0000826,4.76e-09,24;CL:0000084,4.46e-08,25;CL:0000827,4.46e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000051;7.09e-11;53 | |||
|ontology_enrichment_disease=DOID:162!8.24e-27!235;DOID:14566!6.90e-26!239;DOID:2531!1.47e-17!51;DOID:0060083!1.47e-17!51;DOID:0050686!2.06e-14!137;DOID:1240!2.53e-14!39;DOID:0050687!2.30e-11!143;DOID:8692!5.65e-11!31;DOID:305!1.07e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.65e-12;39!DOID:2531;2.78e-11;51!DOID:0060083;2.78e-11;51!DOID:8692;8.17e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.33e-26,235;DOID:14566,1.01e-25,239;DOID:2531,1.41e-17,51;DOID:0060083,1.41e-17,51;DOID:1240,2.44e-14,39;DOID:0050686,2.67e-14,137;DOID:0050687,3.36e-11,143;DOID:8692,5.50e-11,31;DOID:305,1.32e-09,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@KIF20B | |||
}} | }} |
Latest revision as of 22:54, 19 September 2015
Short description: | p1@KIF20B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIF20B_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000260753, ENST00000371728, ENST00000394289, ENST00000416354, NM_016195, uc001kgr.1, uc001kgs.1_5end |
EntrezGene: | KIF20B |
HGNC: | 7212 |
UniProt: | Q96Q89C9J6W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.71e-18 | 53 |
common lymphoid progenitor | 5.71e-18 | 53 |
lymphoid lineage restricted progenitor cell | 2.17e-17 | 52 |
hematopoietic stem cell | 1.74e-13 | 168 |
hematopoietic cell | 3.11e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.07e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-11 | 161 |
lymphocyte of B lineage | 4.76e-09 | 24 |
pro-B cell | 4.76e-09 | 24 |
T cell | 4.46e-08 | 25 |
pro-T cell | 4.46e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.33e-26 | 235 |
disease of cellular proliferation | 1.01e-25 | 239 |
hematologic cancer | 1.41e-17 | 51 |
immune system cancer | 1.41e-17 | 51 |
leukemia | 2.44e-14 | 39 |
organ system cancer | 2.67e-14 | 137 |
cell type cancer | 3.36e-11 | 143 |
myeloid leukemia | 5.50e-11 | 31 |
carcinoma | 1.32e-09 | 106 |