FFCP PHASE2:Hg19::chr22:33454330..33454348,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8224 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11496 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11496 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O14994 | ||
|association_with_transcript=9bp_to_ENST00000358763_5end | |association_with_transcript=9bp_to_ENST00000358763_5end | ||
|cluster_id=chr22:33454330..33454348,- | |cluster_id=chr22:33454330..33454348,- |
Latest revision as of 23:04, 19 September 2015
Short description: | p2@SYN3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYN3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 9bp_to_ENST00000358763_5end |
EntrezGene: | SYN3 |
HGNC: | 11496 |
UniProt: | O14994 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@SYN3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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B cell | 7.83e-16 | 14 |
embryonic stem cell | 4.06e-11 | 5 |
lymphocyte of B lineage | 3.23e-08 | 24 |
pro-B cell | 3.23e-08 | 24 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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neural tube | 2.87e-80 | 56 |
neural rod | 2.87e-80 | 56 |
future spinal cord | 2.87e-80 | 56 |
neural keel | 2.87e-80 | 56 |
regional part of nervous system | 7.57e-75 | 53 |
regional part of brain | 7.57e-75 | 53 |
central nervous system | 2.71e-69 | 81 |
brain | 1.29e-63 | 68 |
future brain | 1.29e-63 | 68 |
nervous system | 2.68e-63 | 89 |
Showing 1 to 10 of 77 entries