FFCP PHASE1:Hg19::chrX:152162673..152162689,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114824 | |EntrezGene=114824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18743 | |HGNC=18743 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PV4 | |UniProt=Q96PV4 | ||
|association_with_transcript=-2bp_to_ENST00000535214,NM_001184924_5end | |association_with_transcript=-2bp_to_ENST00000535214,NM_001184924_5end | ||
|cluster_id=chrX:152162673..152162689,- | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_2_at_PNMA5_5end | |description=CAGE_peak_2_at_PNMA5_5end | ||
|id=chrX:152162673..152162689,- | |id=chrX:152162673..152162689,- | ||
|ontology_enrichment_celltype=CL:0000039!1.52e-07!7;CL:0000586!1.52e-07!7;CL:1000415!2.58e-07!2 | |ontology_enrichment_celltype=CL:0000039!1.52e-07!7;CL:0000586!1.52e-07!7;CL:1000415!2.58e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;2.07e-12;2!CL:0002178;9.66e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,2.07e-12,2;CL:0002178,9.66e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.85e-20;10!UBERON:0005564;2.85e-20;10 | |||
|ontology_enrichment_disease=DOID:5409!1.97e-12!4;DOID:1325!1.74e-07!7;DOID:3904!1.74e-07!7 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!6.58e-14!8;UBERON:0003135!2.85e-10!11 | |ontology_enrichment_uberon=UBERON:0000473!6.58e-14!8;UBERON:0003135!2.85e-10!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.90e-25;8!UBERON:0003135;1.68e-18;11!UBERON:0000991;5.03e-10;21!UBERON:0003101;1.34e-09;22!UBERON:0000079;1.34e-09;22!UBERON:0002110;1.04e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.90e-25,8;UBERON:0003135,1.68e-18,11;UBERON:0000991,5.03e-10,21;UBERON:0009196,5.03e-10,21;UBERON:0009117,5.03e-10,21;UBERON:0005564,5.03e-10,21;UBERON:0004176,1.34e-09,22;UBERON:0003101,1.34e-09,22;UBERON:0000079,1.34e-09,22;UBERON:0002110,1.04e-08,3;UBERON:0006242,1.04e-08,3;UBERON:0002323,5.18e-08,46;UBERON:0004458,1.53e-07,49;UBERON:0003886,7.16e-07,54 | |||
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|short_description=p2@PNMA5 | |short_description=p2@PNMA5 | ||
}} | }} |
Latest revision as of 23:16, 19 September 2015
Short description: | p2@PNMA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PNMA5_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | -2bp_to_ENST00000535214, NM_001184924_5end |
EntrezGene: | PNMA5 |
HGNC: | 18743 |
UniProt: | Q96PV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 2.07e-12 | 2 |
epithelial cell of stomach | 9.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 3.90e-25 | 8 |
male reproductive organ | 1.68e-18 | 11 |
gonad | 5.03e-10 | 21 |
indifferent external genitalia | 5.03e-10 | 21 |
indifferent gonad | 5.03e-10 | 21 |
gonad primordium | 5.03e-10 | 21 |
external genitalia | 1.34e-09 | 22 |
male organism | 1.34e-09 | 22 |
male reproductive system | 1.34e-09 | 22 |
gallbladder | 1.04e-08 | 3 |
gall bladder primordium | 1.04e-08 | 3 |
body cavity | 5.18e-08 | 46 |
body cavity or lining | 1.53e-07 | 49 |
body cavity precursor | 7.16e-07 | 54 |