FFCP PHASE1:Hg19::chr6:116783272..116783399,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:116783272..116783399,+ to FFCP PHASE1:Hg19::chr6:116783272..116783399,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=441168 | |EntrezGene=441168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33391 | |HGNC=33391 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-230bp_to_ENST00000368604_5end | |||
|cluster_id=chr6:116783272..116783399,+ | |||
|coexpression_cluster_id=C1886 | |||
|description=CAGE_peak_1_at_FAM26F_5end | |||
|id=chr6:116783272..116783399,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.26e-26!42;CL:0002009!2.58e-22!65;CL:0000860!3.26e-22!45;CL:0000766!9.21e-22!76;CL:0002194!2.20e-21!63;CL:0000576!2.20e-21!63;CL:0000040!2.20e-21!63;CL:0000559!2.20e-21!63;CL:0000557!2.05e-19!71;CL:0000738!5.03e-19!140;CL:0002087!5.39e-18!119;CL:0000839!8.50e-18!70;CL:0000037!4.27e-17!172;CL:0000566!4.27e-17!172;CL:0000763!3.14e-16!112;CL:0000049!3.14e-16!112;CL:0002032!3.29e-15!165;CL:0000837!3.29e-15!165;CL:0002031!4.38e-15!124;CL:0000988!1.23e-14!182;CL:0000236!9.44e-10!14;CL:0002393!3.54e-07!9;CL:0002397!3.54e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.67e-22;33!CL:0002057;9.67e-22;33!CL:0000576;2.05e-19;48!CL:0000473;2.91e-18;39!CL:0000234;2.91e-18;39!CL:0000766;2.61e-13;69!CL:0000236;1.25e-10;13!CL:0000763;1.42e-09;100!CL:0002087;7.34e-09;104!CL:0000738;8.59e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.06e-30,48;CL:0000234,2.06e-30,48;CL:0000860,2.07e-30,42;CL:0002057,2.07e-30,42;CL:0002009,1.66e-29,61;CL:0000766,1.85e-28,72;CL:0002194,2.16e-28,59;CL:0000576,2.16e-28,59;CL:0000040,2.16e-28,59;CL:0000559,2.16e-28,59;CL:0000738,7.76e-26,136;CL:0000557,1.28e-25,67;CL:0000037,2.92e-25,168;CL:0002087,1.74e-24,115;CL:0000763,1.90e-23,108;CL:0000049,1.90e-23,108;CL:0000839,4.40e-23,66;CL:0002032,1.27e-22,161;CL:0000837,1.27e-22,161;CL:0000988,1.28e-22,177;CL:0002031,2.47e-20,120;CL:0000236,4.44e-11,14;CL:0002393,4.32e-08,9;CL:0002397,4.32e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.70e-22;42!CL:0000049;3.61e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.46e-21!102;UBERON:0003061!7.46e-21!102;UBERON:0002193!7.17e-20!112;UBERON:0002371!4.37e-18!80;UBERON:0001474!1.33e-14!86;UBERON:0002405!8.04e-13!115;UBERON:0004765!2.38e-12!101;UBERON:0001434!2.38e-12!101;UBERON:0002204!9.89e-11!167;UBERON:0003081!4.87e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.54e-27,98;UBERON:0003061,4.54e-27,98;UBERON:0002193,2.86e-25,108;UBERON:0002371,8.03e-23,76;UBERON:0002405,9.23e-21,93;UBERON:0001474,4.91e-19,82;UBERON:0004765,7.58e-17,90;UBERON:0001434,1.63e-13,100;UBERON:0003081,2.56e-09,203;UBERON:0002204,9.26e-09,167 | |||
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| ||
|short_description=p1@FAM26F | |||
}} | }} |
Latest revision as of 01:10, 20 September 2015
Short description: | p1@FAM26F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM26F_5end |
Coexpression cluster: | C1886_CD14CD16_CD14_CD19_Basophils_CD133_renal_blood |
Association with transcript: | -230bp_to_ENST00000368604_5end |
EntrezGene: | FAM26F |
HGNC: | 33391 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.06e-30 | 48 |
phagocyte | 2.06e-30 | 48 |
classical monocyte | 2.07e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.07e-30 | 42 |
macrophage dendritic cell progenitor | 1.66e-29 | 61 |
myeloid leukocyte | 1.85e-28 | 72 |
monopoietic cell | 2.16e-28 | 59 |
monocyte | 2.16e-28 | 59 |
monoblast | 2.16e-28 | 59 |
promonocyte | 2.16e-28 | 59 |
leukocyte | 7.76e-26 | 136 |
granulocyte monocyte progenitor cell | 1.28e-25 | 67 |
hematopoietic stem cell | 2.92e-25 | 168 |
nongranular leukocyte | 1.74e-24 | 115 |
myeloid cell | 1.90e-23 | 108 |
common myeloid progenitor | 1.90e-23 | 108 |
myeloid lineage restricted progenitor cell | 4.40e-23 | 66 |
hematopoietic oligopotent progenitor cell | 1.27e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-22 | 161 |
hematopoietic cell | 1.28e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 2.47e-20 | 120 |
B cell | 4.44e-11 | 14 |
intermediate monocyte | 4.32e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.32e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.54e-27 | 98 |
blood island | 4.54e-27 | 98 |
hemolymphoid system | 2.86e-25 | 108 |
bone marrow | 8.03e-23 | 76 |
immune system | 9.23e-21 | 93 |
bone element | 4.91e-19 | 82 |
skeletal element | 7.58e-17 | 90 |
skeletal system | 1.63e-13 | 100 |
lateral plate mesoderm | 2.56e-09 | 203 |
musculoskeletal system | 9.26e-09 | 167 |