FFCP PHASE1:Hg19::chr22:36597816..36597824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80832 | |EntrezGene=80832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14867 | |HGNC=14867 | ||
|TSSclassifier=strong | |||
|UniProt=E9PS31 | |UniProt=E9PS31 | ||
|association_with_transcript=98bp_to_ENST00000493203_5end | |association_with_transcript=98bp_to_ENST00000493203_5end | ||
|cluster_id=chr22:36597816..36597824,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_APOL4_5end | |description=CAGE_peak_4_at_APOL4_5end | ||
|id=chr22:36597816..36597824,- | |id=chr22:36597816..36597824,- | ||
|ontology_enrichment_celltype=CL:0000763!3.80e-10!112;CL:0000049!3.80e-10!112 | |ontology_enrichment_celltype=CL:0000763!3.80e-10!112;CL:0000049!3.80e-10!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-21;33!CL:0002057;1.32e-21;33!CL:0000473;9.56e-16;39!CL:0000234;9.56e-16;39!CL:0000840;1.55e-15;5!CL:0000576;2.39e-12;48!CL:0000990;1.50e-10;8!CL:0000451;1.00e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.82e-23,66;CL:0002194,1.71e-22,59;CL:0000576,1.71e-22,59;CL:0000040,1.71e-22,59;CL:0000559,1.71e-22,59;CL:0002009,1.04e-21,61;CL:0000557,1.23e-19,67;CL:0000860,1.68e-18,42;CL:0002057,1.68e-18,42;CL:0000766,3.61e-18,72;CL:0000473,4.84e-16,48;CL:0000234,4.84e-16,48;CL:0000763,5.83e-16,108;CL:0000049,5.83e-16,108;CL:0000840,1.58e-15,5;CL:0001029,1.58e-15,5;CL:0002031,4.22e-12,120;CL:0002087,9.47e-11,115;CL:0000990,1.53e-10,8;CL:0002032,5.11e-10,161;CL:0000837,5.11e-10,161;CL:0000037,1.65e-09,168;CL:0000988,6.47e-09,177;CL:0000738,8.18e-09,136;CL:0000451,1.02e-08,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-14;42!UBERON:0010115;3.12e-11;1 | |||
|ontology_enrichment_disease=DOID:1240!9.05e-07!39 | |ontology_enrichment_disease=DOID:1240!9.05e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;3.12e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.94e-17,76;UBERON:0001474,9.24e-16,82;UBERON:0004765,3.25e-14,90;UBERON:0002405,1.06e-13,93;UBERON:0002390,6.46e-13,98;UBERON:0003061,6.46e-13,98;UBERON:0001434,1.27e-12,100;UBERON:0002193,1.47e-11,108;UBERON:0002363,3.63e-11,1;UBERON:0007645,3.63e-11,1;UBERON:0007647,3.63e-11,1;UBERON:0010115,3.63e-11,1;UBERON:0002204,3.85e-08,167 | |||
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| ||
|short_description=p4@APOL4 | |short_description=p4@APOL4 | ||
}} | }} |
Latest revision as of 01:28, 20 September 2015
Short description: | p4@APOL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOL4_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 98bp_to_ENST00000493203_5end |
EntrezGene: | APOL4 |
HGNC: | 14867 |
UniProt: | E9PS31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.82e-23 | 66 |
monopoietic cell | 1.71e-22 | 59 |
monocyte | 1.71e-22 | 59 |
monoblast | 1.71e-22 | 59 |
promonocyte | 1.71e-22 | 59 |
macrophage dendritic cell progenitor | 1.04e-21 | 61 |
granulocyte monocyte progenitor cell | 1.23e-19 | 67 |
classical monocyte | 1.68e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-18 | 42 |
myeloid leukocyte | 3.61e-18 | 72 |
defensive cell | 4.84e-16 | 48 |
phagocyte | 4.84e-16 | 48 |
myeloid cell | 5.83e-16 | 108 |
common myeloid progenitor | 5.83e-16 | 108 |
immature conventional dendritic cell | 1.58e-15 | 5 |
common dendritic progenitor | 1.58e-15 | 5 |
hematopoietic lineage restricted progenitor cell | 4.22e-12 | 120 |
nongranular leukocyte | 9.47e-11 | 115 |
conventional dendritic cell | 1.53e-10 | 8 |
hematopoietic oligopotent progenitor cell | 5.11e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.11e-10 | 161 |
hematopoietic stem cell | 1.65e-09 | 168 |
hematopoietic cell | 6.47e-09 | 177 |
leukocyte | 8.18e-09 | 136 |
dendritic cell | 1.02e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.94e-17 | 76 |
bone element | 9.24e-16 | 82 |
skeletal element | 3.25e-14 | 90 |
immune system | 1.06e-13 | 93 |
hematopoietic system | 6.46e-13 | 98 |
blood island | 6.46e-13 | 98 |
skeletal system | 1.27e-12 | 100 |
hemolymphoid system | 1.47e-11 | 108 |
dura mater | 3.63e-11 | 1 |
future meninx | 3.63e-11 | 1 |
ectomeninx | 3.63e-11 | 1 |
future dura mater | 3.63e-11 | 1 |
musculoskeletal system | 3.85e-08 | 167 |