FFCP PHASE1:Hg19::chr19:55942972..55942977,-: Difference between revisions
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|id=chr19:55942972..55942977,-
|short_description=p8@SHISA7
|description=CAGE_peak_8_at_SHISA7_5end
|association_with_transcript=-214bp_to_AK094959_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=729956 | |EntrezGene=729956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=35409 | |HGNC=35409 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N9E6 | |UniProt=Q8N9E6 | ||
|association_with_transcript=-214bp_to_AK094959_5end | |||
|cluster_id=chr19:55942972..55942977,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_8_at_SHISA7_5end | |||
|id=chr19:55942972..55942977,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.55e-98,2;UBERON:0000200,4.27e-34,6;UBERON:0001871,1.78e-29,6;UBERON:0001950,6.74e-11,20;UBERON:0002619,4.42e-10,22;UBERON:0000956,4.34e-09,25;UBERON:0000203,4.34e-09,25;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34 | |||
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|short_description=p8@SHISA7 | |||
}} | }} |
Latest revision as of 01:44, 20 September 2015
Short description: | p8@SHISA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SHISA7_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -214bp_to_AK094959_5end |
EntrezGene: | SHISA7 |
HGNC: | 35409 |
UniProt: | Q8N9E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.55e-98 | 2 |
gyrus | 4.27e-34 | 6 |
temporal lobe | 1.78e-29 | 6 |
neocortex | 6.74e-11 | 20 |
regional part of cerebral cortex | 4.42e-10 | 22 |
cerebral cortex | 4.34e-09 | 25 |
pallium | 4.34e-09 | 25 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
gray matter | 4.03e-07 | 34 |
telencephalon | 4.03e-07 | 34 |