FFCP PHASE1:Hg19::chr2:216230308..216230359,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=39bp_to_ENST00000494446_5end | |||
|cluster_id=chr2:216230308..216230359,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_50_at_FN1_5end | |||
|id=chr2:216230308..216230359,- | |||
|ontology_enrichment_celltype=CL:0000055!4.91e-31!180;CL:0000057!3.03e-21!75;CL:0000680!7.62e-18!57;CL:0000056!7.62e-18!57;CL:0000355!7.62e-18!57;CL:0000183!1.13e-16!59;CL:0000187!1.82e-16!54;CL:0000393!8.41e-13!60;CL:0000211!8.41e-13!60;CL:0002371!4.13e-12!591;CL:0000192!8.22e-12!42;CL:0000514!8.22e-12!42;CL:0000359!1.53e-11!32;CL:0000048!1.08e-09!430;CL:0000144!1.36e-09!625;CL:0000723!2.54e-09!436;CL:0002494!3.07e-09!16;CL:0002620!1.34e-08!23;CL:0000034!1.55e-08!444;CL:0000222!6.94e-08!119;CL:0000220!1.94e-07!246;CL:0002321!2.68e-07!248;CL:0002334!5.02e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002494;3.43e-12;16!CL:0000134;6.82e-12;55!CL:0000723;2.12e-11;61!CL:0000048;3.40e-10;58!CL:0000057;8.65e-10;73!CL:0000359;1.06e-09;32!CL:0002620;5.16e-09;23!CL:0000187;6.54e-09;55!CL:0002334;2.73e-08;12!CL:0000349;4.95e-08;19!CL:0002320;1.14e-07;188!CL:0000034;1.24e-07;69!CL:0000393;2.18e-07;61!CL:0000211;2.18e-07;61!CL:0000192;4.49e-07;43!CL:0002570;4.94e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.91e-22,76;CL:0000048,7.73e-18,427;CL:0000723,2.43e-17,433;CL:0000680,5.87e-17,58;CL:0000056,5.87e-17,58;CL:0000355,5.87e-17,58;CL:0000034,3.65e-16,441;CL:0000187,3.02e-15,55;CL:0000393,1.73e-12,61;CL:0000211,1.73e-12,61;CL:0002494,4.48e-12,16;CL:0000359,6.71e-10,32;CL:0000192,1.52e-09,43;CL:0000514,1.52e-09,43;CL:0002620,5.51e-09,23;CL:0002320,2.94e-08,361;CL:0000349,4.69e-08,19;CL:0002334,5.57e-08,12;CL:0000134,2.55e-07,354;CL:0002570,4.45e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000355;5.60e-09;58!CL:0000514;4.49e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.63e-19!83;UBERON:0002329!5.63e-19!83;UBERON:0003077!5.63e-19!83;UBERON:0003059!5.63e-19!83;UBERON:0007282!5.63e-19!83;UBERON:0009618!5.63e-19!83;UBERON:0007285!5.63e-19!83;UBERON:0005256!3.96e-18!143;UBERON:0004290!1.80e-17!70;UBERON:0002385!6.99e-16!63;UBERON:0001015!6.99e-16!63;UBERON:0000383!6.99e-16!63;UBERON:0001134!9.03e-16!61;UBERON:0002036!9.03e-16!61;UBERON:0003082!9.03e-16!61;UBERON:0000486!9.45e-16!82;UBERON:0003914!6.67e-14!118;UBERON:0000490!1.63e-13!138;UBERON:0002100!9.74e-13!216;UBERON:0004872!3.09e-12!84;UBERON:0001637!8.99e-12!42;UBERON:0003509!8.99e-12!42;UBERON:0004572!8.99e-12!42;UBERON:0002049!1.31e-11!79;UBERON:0007798!1.31e-11!79;UBERON:0001009!2.57e-10!113;UBERON:0004535!4.99e-10!110;UBERON:0004573!6.40e-10!33;UBERON:0004571!6.40e-10!33;UBERON:0000055!3.39e-09!69;UBERON:0001981!4.69e-09!60;UBERON:0007500!4.69e-09!60;UBERON:0004537!4.69e-09!60;UBERON:0006965!4.69e-09!60;UBERON:0003104!7.05e-08!238;UBERON:0009142!7.05e-08!238;UBERON:0007100!1.47e-07!27;UBERON:0000948!2.00e-07!24;UBERON:0005498!2.00e-07!24;UBERON:0004140!2.00e-07!24;UBERON:0009881!2.00e-07!24;UBERON:0004141!2.00e-07!24;UBERON:0003084!2.00e-07!24;UBERON:0007005!2.00e-07!24;UBERON:0004139!2.00e-07!24;UBERON:0004291!2.00e-07!24;UBERON:0002199!2.81e-07!45;UBERON:0002416!2.81e-07!45;UBERON:0000478!3.35e-07!24;UBERON:0005631!3.49e-07!14;UBERON:0000158!3.49e-07!14;UBERON:0000475!3.51e-07!365;UBERON:0003102!4.09e-07!95;UBERON:0000468!5.35e-07!659;UBERON:0002097!8.74e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.32e-08;22!UBERON:0004573;4.36e-08;33!UBERON:0004571;4.36e-08;33!UBERON:0000478;2.34e-07;24!UBERON:0001637;2.62e-07;42!UBERON:0003509;2.62e-07;42!UBERON:0004572;2.62e-07;42!UBERON:0005631;2.72e-07;10!UBERON:0000158;2.72e-07;10!UBERON:0002384;5.09e-07;198!UBERON:0007100;5.79e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.21e-16,73;UBERON:0002329,3.73e-16,71;UBERON:0003059,3.73e-16,71;UBERON:0007282,3.73e-16,71;UBERON:0004290,3.73e-16,71;UBERON:0009618,3.73e-16,71;UBERON:0003077,1.03e-15,72;UBERON:0007285,1.03e-15,72;UBERON:0007503,1.27e-15,78;UBERON:0001134,5.97e-15,62;UBERON:0002036,5.97e-15,62;UBERON:0003082,5.97e-15,62;UBERON:0002385,8.33e-15,64;UBERON:0001015,8.33e-15,64;UBERON:0000383,8.33e-15,64;UBERON:0000486,4.19e-13,83;UBERON:0005256,1.18e-12,122;UBERON:0003104,1.73e-10,160;UBERON:0009142,1.73e-10,160;UBERON:0000948,9.07e-10,24;UBERON:0005498,9.07e-10,24;UBERON:0004140,9.07e-10,24;UBERON:0009881,9.07e-10,24;UBERON:0004141,9.07e-10,24;UBERON:0003084,9.07e-10,24;UBERON:0007005,9.07e-10,24;UBERON:0004139,9.07e-10,24;UBERON:0004291,9.07e-10,24;UBERON:0004872,1.17e-09,83;UBERON:0001637,1.52e-09,42;UBERON:0003509,1.52e-09,42;UBERON:0004572,1.52e-09,42;UBERON:0002384,4.80e-09,371;UBERON:0003914,6.85e-09,117;UBERON:0004573,8.72e-09,33;UBERON:0004571,8.72e-09,33;UBERON:0000926,3.17e-08,315;UBERON:0004120,3.17e-08,315;UBERON:0006603,3.17e-08,315;UBERON:0007100,4.99e-08,27;UBERON:0000490,5.40e-08,148;UBERON:0004535,1.01e-07,109;UBERON:0002100,2.05e-07,199;UBERON:0000478,2.48e-07,24;UBERON:0001009,3.63e-07,112;UBERON:0002199,4.57e-07,46;UBERON:0002416,4.57e-07,46;UBERON:0005631,6.85e-07,14;UBERON:0000158,6.85e-07,14 | |||
|phase1_expression=4.1786027232228,4.28201047781966,4.36958652697511,5.00366491765652,1.34088328328186,3.48935409640147,0,1.89515962028049,0.261185628199839,0.245733936501509,0,1.52908960491121,2.63766978228454,1.36142988256051,1.32558950291166,6.72325146451775,1.20538905604795,2.19093027116212,1.95173119516203,0.61560529038394,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,136.531845135819,3.35350429851818,2.04580098949649,0.722878304769133,3.00802746381534,0.869079113764942,33.4020097761462,75.4284048969086,0.0945348171640679,1.55210578223795,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,3.39184765154406,0.838998872419812,0,0.626984899610432,0,1.06729878806013,0.33472061276467,0,0,0.488124115096339,0.735326160691737,1.62028389576352,0.0892997282840798,0,0.225222960966644,0,0,0.366403487860815,0,0,0,19.3819061161174,2.15271869829786,14.1677823470144,11.4734648299525,1.41867352879343,3.92474320099615,5.33744978648525,3.7000132262574,5.60179863719579,3.09834545760283,1.47115712802113,7.87058623753643,13.25204626304,0.234321431833797,3.1216007683032,1.1409436430889,2.54062756938062,0.822041490506354,1.29498355494505,0.702254033511242,1.63323337003915,0.737005903870608,0.516628905878827,1.18800285728205,2.71993622206413,2.73048408581408,1.43723628363248,0.336672227908132,0.500474079487857,0.831192346452549,1.31693286264251,2.45190236639216,3.45547535485173,1.92834711372036,3.04962380671065,1.49490172172997,2.54318281391474,3.60109315301283,1.8549455262919,2.31876486041066,1.8611685633159,7.93248761533951,2.33848812386877,6.05841058185875,3.40584624976508,1.13152239773168,4.26011511019937,1.20902517873168,0.67824236924195,0.773043412653187,1.63647672354501,0.573609190778008,0.121973706129595,0,0,0.310983165046111,0,0,1.56449532329816,1.92972281457866,0,5.10804720835177,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,4.41026134156626,5.07020139287323,1.96565443335525,1.77236972004421,0,0.614942192715568,0.686271241194102,0.439001141634502,1.1240175325762,0,0,0.977424915930974,0,0,0,5.28339124061197,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0,0,1.17587489739202,0,2.05984602216551,1.45316969256981,3.06706143332169,0,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0.411309970813294,0,0,0.672786506072164,0.43596006883328,0.36669142910475,1.68053230485111,7.15312891703765,3.381211010224,0.531876233169741,1.04007436911366,1.28603687131071,0,1.0656887160644,0.57191197463259,3.25572963234866,2.46972101034231,1.30294473717494,0.355391948742546,0.791951872933429,0,1.74306691720059,0.099972991182057,0,0,0,1.67737398844108,1.14861935834114,2.85273810081437,4.48822050669496,4.10952645100767,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,2.00068208423871,2.44138521329762,3.53550464602372,5.17444067511769,1.73472656537328,5.97421216462837,3.61135319673263,2.27407504055985,2.0694614258501,3.32112799267718,3.68738337083406,0.695068915744663,0.587403472388222,3.43143423810856,0,0,0,0.303127571446259,4.99306318531491,0.604780586659361,5.95458738765064,15.4996593020943,8.70046292742528,4.10045277618243,4.09365799253363,7.56013429374955,2.96836132889982,1.07946785661859,3.37367278094941,1.31403449622095,1.03850885836724,0.813472649219715,0.241718899183244,2.40607764363942,0,0.68888668898764,0.546273504020151,0.786746489756545,0,0.0770153371044148,0,0,0.422206515571503,0,0,2.80690690932781,1.54227252690289,0.812839312631559,1.00337954770971,0,0,0,0,0,0,0,0,1.23649213977267,0,0.082509499920588,0.574265537996172,0.650060246036521,0,1.16004861950546,1.54048617114644,1.84204409671355,1.65403886981437,3.00776685631166,3.48040065394148,1.36362603865761,1.06838442776085,1.4875642382488,3.45942121257191,4.8492830747942,3.8439956725109,0.929691098594572,10.7036197922418,0.6970372701606,1.84820148105653,1.06461206063404,0.869932992075073,2.96518750566272,0.286249773483982,1.86079184679834,3.79655309662471,1.14378116354295,0,9.84259672478017,3.18203247925937,3.13979456079692,1.2591072030832,0,0.824686816419805,1.01091240786658,4.75530963519025,2.52755073743389,0.48763373908959,0.243713489631284,1.05650146756755,0.682499557039929,0.565621727814851,5.65040583101214,2.75682671773062,1.32687795048244,1.31535265576129,1.73632660280006,4.59126326432643,2.23201414658974,0.92947049429925,1.12678241012897,0.717056761020258,1.3754865741837,6.4200789266625,1.41904425628239,0.844430541190656,2.30506425071931,0,0.349934720244983,0.0962221127255121,0.670302275535787,2.17781969722645,0.941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,16.2346249621629,3.8605408508243,4.60741053148848,0,0,4.78627431598495,0,0,1.79323189425963,0,0,0,0,15.24093979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| |||
|short_description=p50@FN1 | |||
}} |
Latest revision as of 01:52, 20 September 2015
Short description: | p50@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_50_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 39bp_to_ENST00000494446_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.91e-22 | 76 |
multi fate stem cell | 7.73e-18 | 427 |
somatic stem cell | 2.43e-17 | 433 |
muscle precursor cell | 5.87e-17 | 58 |
myoblast | 5.87e-17 | 58 |
multi-potent skeletal muscle stem cell | 5.87e-17 | 58 |
stem cell | 3.65e-16 | 441 |
muscle cell | 3.02e-15 | 55 |
electrically responsive cell | 1.73e-12 | 61 |
electrically active cell | 1.73e-12 | 61 |
cardiocyte | 4.48e-12 | 16 |
vascular associated smooth muscle cell | 6.71e-10 | 32 |
smooth muscle cell | 1.52e-09 | 43 |
smooth muscle myoblast | 1.52e-09 | 43 |
skin fibroblast | 5.51e-09 | 23 |
connective tissue cell | 2.94e-08 | 361 |
extraembryonic cell | 4.69e-08 | 19 |
preadipocyte | 5.57e-08 | 12 |
mesenchymal cell | 2.55e-07 | 354 |
mesenchymal stem cell of adipose | 4.45e-07 | 8 |