FFCP PHASE1:Hg19::chr17:38652332..38652344,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:38652332..38652344,-
|short_description=p18@TNS4
|description=CAGE_peak_18_at_TNS4_5end
|association_with_transcript=-45bp_to_BC018706_5end
|EntrezGene=8...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84951 | |EntrezGene=84951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24352 | |HGNC=24352 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZW8 | |UniProt=Q8IZW8 | ||
|association_with_transcript=-45bp_to_BC018706_5end | |||
|cluster_id=chr17:38652332..38652344,- | |||
|coexpression_cluster_id=C436 | |||
|description=CAGE_peak_18_at_TNS4_5end | |||
|id=chr17:38652332..38652344,- | |||
|ontology_enrichment_celltype=CL:0002076!4.35e-40!43;CL:0000223!2.44e-27!59;CL:0002368!3.35e-23!13;CL:0000066!4.05e-19!254;CL:0002251!5.90e-19!21;CL:0002202!1.09e-12!9;CL:0002632!1.09e-12!9;CL:0000622!2.81e-11!5;CL:0000068!5.44e-11!3;CL:0000069!5.44e-11!3;CL:0000307!5.44e-11!3;CL:0000377!5.44e-11!3;CL:0002328!3.71e-10!3;CL:0002621!4.34e-10!3;CL:0000154!2.18e-09!6;CL:0000317!4.95e-08!2;CL:1000448!4.95e-08!2;CL:0002308!4.95e-08!2;CL:0002140!4.95e-08!2;CL:0000244!8.99e-08!4;CL:0000731!8.99e-08!4;CL:0002536!1.56e-07!2;CL:0000362!7.23e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000317;1.34e-40;2!CL:1000448;1.34e-40;2!CL:0002308;1.34e-40;2!CL:0002140;1.34e-40;2!CL:0000622;3.24e-36;5!CL:0000154;2.51e-30;6!CL:0002231;3.56e-27;3!CL:0000307;3.56e-27;3!CL:0000362;1.24e-20;9!CL:0000150;1.73e-20;9!CL:0002368;2.61e-14;13!CL:0002159;1.60e-13;14!CL:0002076;8.47e-12;42!CL:0002202;9.65e-10;9!CL:0002632;9.65e-10;9!CL:0002623;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.01e-40,2;CL:1000448,2.01e-40,2;CL:0002308,2.01e-40,2;CL:0002140,2.01e-40,2;CL:0000622,3.66e-36,5;CL:0000154,2.78e-30,6;CL:0002231,1.82e-27,3;CL:0000068,6.06e-27,3;CL:0000069,6.06e-27,3;CL:0000307,6.06e-27,3;CL:0000377,6.06e-27,3;CL:0000362,1.52e-20,9;CL:0000150,1.85e-20,9;CL:0002076,7.56e-17,42;CL:0002368,3.13e-14,13;CL:0002159,1.82e-13,14;CL:0000223,3.42e-12,58;CL:0002202,1.15e-09,9;CL:0002632,1.15e-09,9;CL:0002623,6.34e-08,3;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;3.56e-27;3!CL:0000223;2.06e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.30e-21!14;UBERON:0000158!8.30e-21!14;UBERON:0001004!3.63e-17!72;UBERON:0004119!5.58e-17!169;UBERON:0000925!5.58e-17!169;UBERON:0006595!5.58e-17!169;UBERON:0000166!9.76e-16!21;UBERON:0000161!2.44e-14!35;UBERON:0000165!1.63e-13!28;UBERON:0000930!1.63e-13!28;UBERON:0004923!1.88e-11!57;UBERON:0000305!2.32e-11!7;UBERON:0000344!2.51e-11!12;UBERON:0000478!2.97e-11!24;UBERON:0003124!4.26e-11!7;UBERON:0004815!3.71e-10!3;UBERON:0002031!3.71e-10!3;UBERON:0000365!4.07e-10!5;UBERON:0001949!4.34e-10!3;UBERON:0003729!4.37e-10!5;UBERON:0004871!6.80e-10!8;UBERON:0001007!1.50e-08!155;UBERON:0001555!1.50e-08!155;UBERON:0007026!1.50e-08!155;UBERON:0005910!1.96e-08!6;UBERON:0000065!2.11e-08!53;UBERON:0003102!2.40e-08!95;UBERON:0001444!4.37e-08!48;UBERON:0002419!4.95e-08!2;UBERON:0007771!4.95e-08!2;UBERON:0003297!4.95e-08!2;UBERON:0001821!4.95e-08!2;UBERON:0003487!4.95e-08!2;UBERON:0001820!4.95e-08!2;UBERON:0005089!4.95e-08!2;UBERON:0005088!4.95e-08!2;UBERON:0007196!6.97e-08!14;UBERON:0001558!6.97e-08!14;UBERON:0002185!1.03e-07!4;UBERON:0001987!1.49e-07!4;UBERON:0004340!1.49e-07!4;UBERON:0003343!2.56e-07!4;UBERON:0004785!2.56e-07!4;UBERON:0000077!5.13e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.34e-40;2!UBERON:0007771;1.34e-40;2!UBERON:0003297;1.34e-40;2!UBERON:0001821;1.34e-40;2!UBERON:0003487;1.34e-40;2!UBERON:0001820;1.34e-40;2!UBERON:0001003;1.15e-12;15!UBERON:0007376;1.15e-12;15!UBERON:0003126;2.98e-12;7!UBERON:0001005;2.98e-12;7!UBERON:0002365;1.45e-10;31!UBERON:0002330;1.45e-10;31!UBERON:0002367;3.89e-08;11!UBERON:0010147;3.89e-08;11!UBERON:0003937;1.57e-07;12!UBERON:0005399;1.57e-07;12!UBERON:0002530;3.22e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.01e-40,2;UBERON:0007771,2.01e-40,2;UBERON:0003297,2.01e-40,2;UBERON:0001821,2.01e-40,2;UBERON:0003487,2.01e-40,2;UBERON:0001820,2.01e-40,2;UBERON:0005089,2.01e-40,2;UBERON:0005088,2.01e-40,2;UBERON:0001003,1.30e-12,15;UBERON:0007376,1.30e-12,15;UBERON:0007383,1.30e-12,15;UBERON:0003126,3.74e-12,7;UBERON:0001005,3.74e-12,7;UBERON:0002530,4.26e-12,59;UBERON:0002365,1.15e-10,31;UBERON:0002330,1.15e-10,31;UBERON:0002367,3.25e-08,11;UBERON:0010147,3.25e-08,11;UBERON:0009846,3.25e-08,11;UBERON:0003353,3.25e-08,11;UBERON:0004902,3.25e-08,11;UBERON:0003820,3.25e-08,11;UBERON:0009847,3.25e-08,11;UBERON:0003937,1.33e-07,12;UBERON:0005399,1.33e-07,12;UBERON:0003102,3.81e-07,99 | |||
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| ||
|short_description=p18@TNS4 | |||
}} | }} |
Latest revision as of 02:17, 20 September 2015
Short description: | p18@TNS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TNS4_5end |
Coexpression cluster: | C436_Sebocyte_Prostate_Keratinocyte_Urothelial_Small_Mammary_salivary |
Association with transcript: | -45bp_to_BC018706_5end |
EntrezGene: | TNS4 |
HGNC: | 24352 |
UniProt: | Q8IZW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.01e-40 | 2 |
epithelial cell of sweat gland | 2.01e-40 | 2 |
epithelial cell of skin gland | 2.01e-40 | 2 |
acinar cell of sebaceous gland | 2.01e-40 | 2 |
acinar cell | 3.66e-36 | 5 |
protein secreting cell | 2.78e-30 | 6 |
epithelial cell of prostate | 1.82e-27 | 3 |
duct epithelial cell | 6.06e-27 | 3 |
branched duct epithelial cell | 6.06e-27 | 3 |
tracheal epithelial cell | 6.06e-27 | 3 |
tracheoblast | 6.06e-27 | 3 |
epidermal cell | 1.52e-20 | 9 |
glandular epithelial cell | 1.85e-20 | 9 |
endo-epithelial cell | 7.56e-17 | 42 |
respiratory epithelial cell | 3.13e-14 | 13 |
general ecto-epithelial cell | 1.82e-13 | 14 |
endodermal cell | 3.42e-12 | 58 |
epithelial cell of tracheobronchial tree | 1.15e-09 | 9 |
epithelial cell of lower respiratory tract | 1.15e-09 | 9 |
acinar cell of salivary gland | 6.34e-08 | 3 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.01e-40 | 2 |
epidermis gland | 2.01e-40 | 2 |
gland of integumental system | 2.01e-40 | 2 |
sebaceous gland | 2.01e-40 | 2 |
skin sebaceous gland | 2.01e-40 | 2 |
sweat gland | 2.01e-40 | 2 |
sweat gland placode | 2.01e-40 | 2 |
sebaceous gland placode | 2.01e-40 | 2 |
skin epidermis | 1.30e-12 | 15 |
outer epithelium | 1.30e-12 | 15 |
enveloping layer of ectoderm | 1.30e-12 | 15 |
trachea | 3.74e-12 | 7 |
respiratory airway | 3.74e-12 | 7 |
gland | 4.26e-12 | 59 |
exocrine gland | 1.15e-10 | 31 |
exocrine system | 1.15e-10 | 31 |
prostate gland | 3.25e-08 | 11 |
male accessory sex gland | 3.25e-08 | 11 |
embryonic cloacal epithelium | 3.25e-08 | 11 |
epithelium of hindgut | 3.25e-08 | 11 |
urogenital sinus epithelium | 3.25e-08 | 11 |
prostate bud | 3.25e-08 | 11 |
prostate field | 3.25e-08 | 11 |
sex gland | 1.33e-07 | 12 |
male reproductive gland | 1.33e-07 | 12 |
surface structure | 3.81e-07 | 99 |