FFCP PHASE1:Hg19::chr10:96305516..96305531,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:96305516..96305531,+ to FFCP PHASE1:Hg19::chr10:96305516..96305531,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3070 | |EntrezGene=3070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4861 | |HGNC=4861 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_uc001kjs.2_5end | |||
|cluster_id=chr10:96305516..96305531,+ | |||
|coexpression_cluster_id=C3061 | |||
|description=CAGE_peak_2_at_HELLS_5end | |||
|id=chr10:96305516..96305531,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.34e-14!53;CL:0000051!1.34e-14!53;CL:0000838!4.24e-14!52;CL:0000945!5.81e-10!24;CL:0000826!5.81e-10!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.15e-10;24!CL:0000542;4.66e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.77e-15,53;CL:0000051,7.77e-15,53;CL:0000838,2.69e-14,52;CL:0000945,7.87e-11,24;CL:0000826,7.87e-11,24 | |||
|ontology_enrichment_development_v019=CL:0000051;4.66e-09;53 | |||
|ontology_enrichment_disease=DOID:162!2.91e-35!235;DOID:14566!1.45e-33!239;DOID:0050687!1.57e-24!143;DOID:305!1.63e-21!106;DOID:0050686!8.38e-18!137;DOID:2531!5.91e-11!51;DOID:0060083!5.91e-11!51;DOID:1240!9.41e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:305;1.42e-07;106!DOID:2531;5.21e-07;51!DOID:0060083;5.21e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.78e-34,235;DOID:14566,1.01e-32,239;DOID:0050687,2.09e-24,143;DOID:305,3.23e-22,106;DOID:0050686,2.44e-17,137;DOID:2531,1.40e-10,51;DOID:0060083,1.40e-10,51;DOID:1240,1.82e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,0,0,0,2.53299878168311,0,0,0.245733936501509,0.697801167972428,1.09220686065086,0,0.495065411840187,0.331397375727916,0,0.602694528023977,0,0.975865597581014,1.47745269692145,1.83600622119828,0.313454721478088,2.0036519099174,2.87436292653057,3.26410862946487,6.49513948857586,5.33653831424647,8.89431828844575,0,2.30297638858328,0.154816123316076,0.919421224478927,0.6024118375565,0.739508020333575,10.6904736800816,7.96147701929561,4.40400659002271,1.10799081706375,0.200544447470142,0,0.447830948479849,0.971680998056939,0.515151135268373,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0,0,0,0,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0.217188844705117,1.21079900526674,0.368277635987565,0,0,0,0.419317291016752,0.112328631146495,0,0.32145117339416,0.285012743741249,0,1.27864907635244,3.51992488922645,7.09980194640771,5.33705552318133,3.84057200309856,3.60356388332411,3.4485146397269,2.64417949113945,1.90810750907073,1.1384259382189,4.11066032559657,5.3518251937532,2.64342657158052,1.12101712596307,2.63384084775077,2.16380747125216,1.57204305099666,1.85041349099558,9.36244374187797,2.60737813306872,1.89379122293893,1.94826728407911,5.34770193048833,7.07054177939609,5.75988125917415,6.49929273036037,2.43373507478783,3.90178042679635,4.27538551969558,2.21080014228679,1.44901542867526,1.77943875794473,1.33770414044857,2.09071047609954,4.87230173599535,5.3650869104269,4.46715679127419,5.06039384039006,2.86708872891687,3.25541726928209,1.90090408889675,2.25862678616659,3.83959833463255,3.74792179657038,3.07810427657222,4.92676798152628,1.81446068902259,2.94184215361858,1.30341963494519,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0.144846518960824,0.795285947051099,0,3.40325341790644,0.221729397462564,1.66886092816939,2.88153966094968,0.728590576585084,0.370784442784429,0,0.174129737299267,0,0.953962497221368,1.71598473234038,1.48583000531826,1.19257444420023,0,0,1.13061588384802,2.51699661725944,0.550236083880135,1.04497483268405,0.258416759169329,0.71153252537342,1.00416183829401,0,0.760272105718513,0,2.94130464276695,0,3.66128885964727,2.46982309888787,3.60356737546631,0,0,0.549605231791222,0,0,0.436094052142534,0.496971951695318,0.886413581652058,0.794455084879313,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,0,1.55605517699883,0.942974704487816,1.14423332179421,0.605429710579726,0,0.70296429550139,0,0.570471821544449,0.149448680551801,2.81842796745036,2.91371299862637,4.3539750077697,1.02077085627447,2.33385202892359,0.413303124703062,1.18800285728205,0.247266929278557,0.910161361938026,0.718618141816238,4.20840284885166,2.62748891731125,2.77064115484183,0.438977620880838,0.919463387397059,0.300476117813194,1.13432183160021,3.04962380671065,0.640672166455702,0.635795703478686,2.70081986475962,1.64884046781502,0.257640540045629,0.18611685633159,6.91982962189192,1.65642908774038,1.51460264546469,0.460249493211497,0.646584227275248,1.06502877754984,0.806016785821122,1.01736355386293,1.15956511897978,1.36373060295417,2.29443676311203,11.8314494945708,15.1083935886493,10.6898427439957,9.1221728413526,9.33587148239825,11.6792754904266,0,0,0,0.464367928031979,1.44375896333917,5.91534000199219,3.03452442140583,4.09718750801919,3.97058301836618,3.26819166138609,3.55905928666645,4.1797705529651,2.5508790466295,3.46272441251751,0.738155454624648,0,0,0,1.26755034821831,0,1.18157981336281,10.5951143859516,2.09080345523293,0.686271241194102,1.20725313949488,0,1.60846355858609,1.66659201285353,0.325808305310325,0,0,1.73895607462615,0.939269553886573,0.433099343283221,0,0.380508304469197,0.790204397959275,0,0.492434012174795,0.468008530278475,0.594524649154913,0.93733833986777,0.16798212819886,1.98485136139341,1.16426079513703,3.19697332365358,1.15014803749563,0.492663237895943,0.44024217006613,0,0.144119953416961,0,2.73040945456327,1.52795370223311,1.17217447210047,0,1.64523988325318,0.901029173531752,0.857479297891735,2.13049060256185,1.74384027533312,2.12681028880755,0.646358578788889,0,0,0,1.04007436911366,1.28603687131071,0,0.266422179016099,0.57191197463259,0,0.823240336780769,1.30294473717494,1.06617584622764,1.58390374586686,0.301439377059586,0,0.599837947092342,1.2162378064119,0.502257091432126,0,0.718874566474748,0,7.13184525203592,0.723906533337896,0.205476322550383,2.86497541183833,2.91421374383171,2.36436912242313,0.862510299438069,0.898401253958239,2.28685161800217,5.20559415430487,0.773288812777695,0.670065061337395,3.18969375826582,0.749007023947182,0,0,0.736148950314839,0,0.813795071099207,1.03985430765404,0.535286966391485,0.157702415033935,0.819989904948992,0,0,0,0.664225598535437,0.553107505625109,1.21637060255316,0.195801157462741,0,1.03384013061444,1.2942852049117,1.70764092485511,0.303127571446259,0,1.20956117331872,0.496215615637554,1.07423381301644,0.561320188866147,0.384417447767103,0.5117072490667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| ||
|short_description=p2@HELLS | |||
}} | }} |
Latest revision as of 02:18, 20 September 2015
Short description: | p2@HELLS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HELLS_5end |
Coexpression cluster: | C3061_granulocyte_testicular_hepatoblastoma_HES3GFP_retinoblastoma_H9_Hodgkin |
Association with transcript: | -11bp_to_uc001kjs.2_5end |
EntrezGene: | HELLS |
HGNC: | 4861 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.77e-15 | 53 |
common lymphoid progenitor | 7.77e-15 | 53 |
lymphoid lineage restricted progenitor cell | 2.69e-14 | 52 |
lymphocyte of B lineage | 7.87e-11 | 24 |
pro-B cell | 7.87e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.78e-34 | 235 |
disease of cellular proliferation | 1.01e-32 | 239 |
cell type cancer | 2.09e-24 | 143 |
carcinoma | 3.23e-22 | 106 |
organ system cancer | 2.44e-17 | 137 |
hematologic cancer | 1.40e-10 | 51 |
immune system cancer | 1.40e-10 | 51 |
leukemia | 1.82e-07 | 39 |