FFCP PHASE1:Hg19::chr12:6875684..6875720,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5763 | |EntrezGene=5763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9629 | |HGNC=9629 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000436860,ENST00000540828_5end | |association_with_transcript=0bp_to_ENST00000436860,ENST00000540828_5end | ||
|cluster_id=chr12:6875684..6875720,+ | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_2_at_PTMS_5end | |description=CAGE_peak_2_at_PTMS_5end | ||
|id=chr12:6875684..6875720,+ | |id=chr12:6875684..6875720,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.91e-24!180;CL:0000222!7.10e-20!119;CL:0000220!7.55e-19!246;CL:0002321!1.27e-18!248;CL:0000183!1.03e-12!59;CL:0000057!1.64e-11!75;CL:0000680!3.28e-11!57;CL:0000056!3.28e-11!57;CL:0000355!3.28e-11!57;CL:0000187!1.43e-10!54;CL:0000548!1.88e-10!679;CL:0000004!1.88e-10!679;CL:0000255!1.88e-10!679;CL:0000066!2.50e-10!254;CL:0000115!3.40e-10!35;CL:0000012!6.09e-10!682;CL:0000144!2.34e-09!625;CL:0002078!4.72e-09!44;CL:0002371!5.12e-09!591;CL:0000213!5.31e-09!57;CL:0000215!5.31e-09!57;CL:0002139!8.82e-09!24;CL:0000393!1.15e-08!60;CL:0000211!1.15e-08!60;CL:0000192!2.03e-08!42;CL:0000514!2.03e-08!42;CL:0000071!3.01e-08!18;CL:0002546!3.01e-08!18;CL:0000359!5.56e-07!32 | |ontology_enrichment_celltype=CL:0000055!4.91e-24!180;CL:0000222!7.10e-20!119;CL:0000220!7.55e-19!246;CL:0002321!1.27e-18!248;CL:0000183!1.03e-12!59;CL:0000057!1.64e-11!75;CL:0000680!3.28e-11!57;CL:0000056!3.28e-11!57;CL:0000355!3.28e-11!57;CL:0000187!1.43e-10!54;CL:0000548!1.88e-10!679;CL:0000004!1.88e-10!679;CL:0000255!1.88e-10!679;CL:0000066!2.50e-10!254;CL:0000115!3.40e-10!35;CL:0000012!6.09e-10!682;CL:0000144!2.34e-09!625;CL:0002078!4.72e-09!44;CL:0002371!5.12e-09!591;CL:0000213!5.31e-09!57;CL:0000215!5.31e-09!57;CL:0002139!8.82e-09!24;CL:0000393!1.15e-08!60;CL:0000211!1.15e-08!60;CL:0000192!2.03e-08!42;CL:0000514!2.03e-08!42;CL:0000071!3.01e-08!18;CL:0002546!3.01e-08!18;CL:0000359!5.56e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000115;8.75e-09;36!CL:0002139;9.22e-09;24!CL:0000071;3.08e-08;18!CL:0000359;9.71e-07;32!CL:0000192;9.93e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.53e-20,121;CL:0002321,3.24e-19,250;CL:0000680,1.12e-11,58;CL:0000056,1.12e-11,58;CL:0000355,1.12e-11,58;CL:0000057,3.25e-11,76;CL:0000187,4.94e-11,55;CL:0000115,2.46e-10,36;CL:0000066,4.96e-10,253;CL:0002078,3.31e-09,45;CL:0000213,3.71e-09,58;CL:0000215,3.71e-09,58;CL:0000393,4.41e-09,61;CL:0000211,4.41e-09,61;CL:0000192,7.11e-09,43;CL:0000514,7.11e-09,43;CL:0002139,8.82e-09,24;CL:0000071,3.01e-08,18;CL:0002546,3.01e-08,18;CL:0000359,5.56e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;3.08e-08;18!CL:0000355;8.08e-07;58!CL:0000514;9.93e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!7.02e-19!118;UBERON:0002049!1.77e-18!79;UBERON:0007798!1.77e-18!79;UBERON:0002100!2.34e-17!216;UBERON:0003104!1.03e-16!238;UBERON:0009142!1.03e-16!238;UBERON:0004872!2.08e-16!84;UBERON:0005256!3.58e-16!143;UBERON:0000055!1.90e-15!69;UBERON:0001981!6.54e-14!60;UBERON:0007500!6.54e-14!60;UBERON:0004537!6.54e-14!60;UBERON:0006965!6.54e-14!60;UBERON:0000914!4.60e-13!83;UBERON:0002329!4.60e-13!83;UBERON:0003077!4.60e-13!83;UBERON:0003059!4.60e-13!83;UBERON:0007282!4.60e-13!83;UBERON:0009618!4.60e-13!83;UBERON:0007285!4.60e-13!83;UBERON:0004535!2.48e-12!110;UBERON:0004290!3.10e-12!70;UBERON:0000490!3.34e-12!138;UBERON:0000481!4.54e-12!347;UBERON:0001009!7.85e-12!113;UBERON:0000475!3.13e-11!365;UBERON:0000926!7.63e-11!448;UBERON:0004120!7.63e-11!448;UBERON:0006603!7.63e-11!448;UBERON:0000486!1.21e-10!82;UBERON:0000468!1.63e-10!659;UBERON:0000119!1.71e-10!312;UBERON:0000477!2.27e-10!286;UBERON:0001134!3.40e-10!61;UBERON:0002036!3.40e-10!61;UBERON:0003082!3.40e-10!61;UBERON:0002385!5.66e-10!63;UBERON:0001015!5.66e-10!63;UBERON:0000383!5.66e-10!63;UBERON:0001637!8.20e-10!42;UBERON:0003509!8.20e-10!42;UBERON:0004572!8.20e-10!42;UBERON:0000483!1.23e-09!309;UBERON:0000467!1.03e-08!625;UBERON:0000480!1.27e-08!626;UBERON:0001986!3.01e-08!18;UBERON:0004638!3.01e-08!18;UBERON:0004852!3.01e-08!18;UBERON:0001048!3.23e-08!168;UBERON:0004111!3.88e-08!241;UBERON:0009569!5.51e-08!113;UBERON:0003103!7.61e-08!69;UBERON:0000487!7.84e-08!22;UBERON:0006914!2.07e-07!25;UBERON:0004573!9.96e-07!33;UBERON:0004571!9.96e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;2.62e-08;56!UBERON:0001981;2.62e-08;56!UBERON:0004537;2.62e-08;56!UBERON:0004638;3.08e-08;18!UBERON:0001986;3.08e-08;18!UBERON:0004852;3.08e-08;18!UBERON:0003914;3.89e-08;74!UBERON:0002049;6.31e-08;75!UBERON:0007798;6.31e-08;75!UBERON:0000487;8.12e-08;22!UBERON:0000055;1.76e-07;65!UBERON:0006914;2.13e-07;25!UBERON:0001637;4.37e-07;42!UBERON:0003509;4.37e-07;42!UBERON:0004572;4.37e-07;42 | |||
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| ||
|short_description=p2@PTMS | |short_description=p2@PTMS | ||
}} | }} |
Latest revision as of 02:41, 20 September 2015
Short description: | p2@PTMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTMS_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000436860, ENST00000540828_5end |
EntrezGene: | PTMS |
HGNC: | 9629 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.53e-20 | 121 |
embryonic cell | 3.24e-19 | 250 |
muscle precursor cell | 1.12e-11 | 58 |
myoblast | 1.12e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.12e-11 | 58 |
fibroblast | 3.25e-11 | 76 |
muscle cell | 4.94e-11 | 55 |
endothelial cell | 2.46e-10 | 36 |
epithelial cell | 4.96e-10 | 253 |
meso-epithelial cell | 3.31e-09 | 45 |
lining cell | 3.71e-09 | 58 |
barrier cell | 3.71e-09 | 58 |
electrically responsive cell | 4.41e-09 | 61 |
electrically active cell | 4.41e-09 | 61 |
smooth muscle cell | 7.11e-09 | 43 |
smooth muscle myoblast | 7.11e-09 | 43 |
endothelial cell of vascular tree | 8.82e-09 | 24 |
blood vessel endothelial cell | 3.01e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.01e-08 | 18 |
vascular associated smooth muscle cell | 5.56e-07 | 32 |