FFCP PHASE1:Hg19::chr17:38859741..38859749,-: Difference between revisions
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|id=chr17:38859741..38859749,-
|short_description=p6@KRT24
|description=CAGE_peak_6_at_KRT24_5end
|association_with_transcript=227bp_to_BC111964,BC111968_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=192666 | |EntrezGene=192666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18527 | |HGNC=18527 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M2I5 | |UniProt=Q2M2I5 | ||
|association_with_transcript=227bp_to_BC111964,BC111968_5end | |||
|cluster_id=chr17:38859741..38859749,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_6_at_KRT24_5end | |||
|id=chr17:38859741..38859749,- | |||
|ontology_enrichment_celltype=CL:0002541!2.63e-23!3;CL:0002623!5.15e-23!3;CL:0000342!1.44e-17!1;CL:0002565!1.44e-17!1;CL:0002537!1.61e-14!5;CL:0000622!3.15e-14!5;CL:0000154!5.08e-12!6;CL:0000150!2.55e-08!9;CL:0000349!7.28e-07!3;CL:0002577!7.28e-07!3;CL:0000214!8.62e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.89e-53;3!CL:0000349;3.17e-52;19!CL:0002537;1.05e-32;5!CL:0002577;1.83e-14;3!CL:0000134;3.81e-10;55!CL:0000723;2.73e-07;61!CL:0000034;4.59e-07;69!CL:0000048;4.88e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.75e-53,3;CL:0000349,3.17e-52,19;CL:0002537,1.05e-32,5;CL:0002577,2.09e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.26e-42!14;UBERON:0000158!1.26e-42!14;UBERON:0003124!3.39e-38!7;UBERON:0000478!7.19e-25!24;UBERON:0000476!2.63e-23!3;UBERON:0000920!2.63e-23!3;UBERON:0004923!4.01e-18!57;UBERON:0002372!1.22e-17!1;UBERON:0001961!1.22e-17!1;UBERON:0001744!1.22e-17!1;UBERON:0001735!1.22e-17!1;UBERON:0002506!1.44e-17!1;UBERON:0001769!1.44e-17!1;UBERON:0001987!1.71e-17!4;UBERON:0004340!1.71e-17!4;UBERON:0001044!5.08e-12!6;UBERON:0003293!5.08e-12!6;UBERON:0003294!5.08e-12!6;UBERON:0010047!5.08e-12!6;UBERON:0000167!5.08e-12!6;UBERON:0000305!1.21e-10!7;UBERON:0004871!1.99e-09!8;UBERON:0000078!7.25e-09!18;UBERON:0000166!1.12e-07!21;UBERON:0003408!1.42e-07!10;UBERON:0006915!8.62e-07!3;UBERON:0002018!8.62e-07!3;UBERON:0002217!8.62e-07!3;UBERON:0007616!8.62e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.16e-63;10!UBERON:0000158;2.16e-63;10!UBERON:0003124;4.89e-53;3!UBERON:0000920;4.89e-53;3!UBERON:0000478;1.51e-41;24!UBERON:0000305;1.02e-23;7!UBERON:0001987;3.42e-11;4!UBERON:0004923;1.43e-08;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.65e-70,14;UBERON:0000158,1.65e-70,14;UBERON:0000920,3.75e-53,3;UBERON:0003124,5.43e-51,7;UBERON:0000478,1.51e-41,24;UBERON:0000305,1.02e-23,7;UBERON:0004871,6.64e-21,8;UBERON:0004923,1.27e-15,66;UBERON:0001987,3.79e-11,4;UBERON:0004340,3.79e-11,4 | |||
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|short_description=p6@KRT24 | |||
}} | }} |
Latest revision as of 03:17, 20 September 2015
Short description: | p6@KRT24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KRT24_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 227bp_to_BC111964, BC111968_5end |
EntrezGene: | KRT24 |
HGNC: | 18527 |
UniProt: | Q2M2I5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.75e-53 | 3 |
extraembryonic cell | 3.17e-52 | 19 |
amnion mesenchymal stem cell | 1.05e-32 | 5 |
placental epithelial cell | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.65e-70 | 14 |
membranous layer | 1.65e-70 | 14 |
egg chorion | 3.75e-53 | 3 |
chorion | 5.43e-51 | 7 |
extraembryonic structure | 1.51e-41 | 24 |
amnion | 1.02e-23 | 7 |
somatic layer of lateral plate mesoderm | 6.64e-21 | 8 |
organ component layer | 1.27e-15 | 66 |
placenta | 3.79e-11 | 4 |
allantois | 3.79e-11 | 4 |