FFCP PHASE1:Hg19::chr10:97453693..97453726,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:97453693..97453726,-
|short_description=p2@TCTN3
|description=CAGE_peak_2_at_TCTN3_5end
|association_with_transcript=0bp_to_ENST00000480852,ENST0000049739...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26123 | |EntrezGene=26123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24519 | |HGNC=24519 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000480852,ENST00000497399,uc009xux.1_5end | |||
|cluster_id=chr10:97453693..97453726,- | |||
|description=CAGE_peak_2_at_TCTN3_5end | |||
|id=chr10:97453693..97453726,- | |||
|ontology_enrichment_celltype=CL:0000055!9.47e-22!180;CL:0000057!5.43e-11!75;CL:0000183!5.78e-11!59;CL:0000680!2.27e-10!57;CL:0000056!2.27e-10!57;CL:0000355!2.27e-10!57;CL:0000222!6.73e-10!119;CL:0000220!8.28e-10!246;CL:0002321!1.35e-09!248;CL:0000187!1.43e-09!54;CL:0000393!1.88e-08!60;CL:0000211!1.88e-08!60;CL:0000192!1.06e-07!42;CL:0000514!1.06e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.65e-11,76;CL:0000680,1.22e-10,58;CL:0000056,1.22e-10,58;CL:0000355,1.22e-10,58;CL:0000222,2.13e-10,121;CL:0002321,5.10e-10,250;CL:0000187,7.77e-10,55;CL:0000393,1.05e-08,61;CL:0000211,1.05e-08,61;CL:0000192,5.78e-08,43;CL:0000514,5.78e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.39e-14!216;UBERON:0000475!3.05e-14!365;UBERON:0005256!1.13e-13!143;UBERON:0000481!3.74e-13!347;UBERON:0003104!4.00e-13!238;UBERON:0009142!4.00e-13!238;UBERON:0000914!3.95e-12!83;UBERON:0002329!3.95e-12!83;UBERON:0003077!3.95e-12!83;UBERON:0003059!3.95e-12!83;UBERON:0007282!3.95e-12!83;UBERON:0009618!3.95e-12!83;UBERON:0007285!3.95e-12!83;UBERON:0004290!4.73e-11!70;UBERON:0000486!2.57e-10!82;UBERON:0000468!1.32e-09!659;UBERON:0000119!1.86e-09!312;UBERON:0000490!4.03e-09!138;UBERON:0001134!4.29e-09!61;UBERON:0002036!4.29e-09!61;UBERON:0003082!4.29e-09!61;UBERON:0000483!5.54e-09!309;UBERON:0002385!8.44e-09!63;UBERON:0001015!8.44e-09!63;UBERON:0000383!8.44e-09!63;UBERON:0000480!5.49e-08!626;UBERON:0000467!1.09e-07!625;UBERON:0001048!4.08e-07!168;UBERON:0005156!7.65e-07!59;UBERON:0000990!7.65e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.01e-15,160;UBERON:0009142,1.01e-15,160;UBERON:0002100,1.98e-13,199;UBERON:0005256,5.08e-12,122;UBERON:0007524,2.24e-11,73;UBERON:0007503,2.45e-11,78;UBERON:0002329,2.56e-11,71;UBERON:0003059,2.56e-11,71;UBERON:0007282,2.56e-11,71;UBERON:0004290,2.56e-11,71;UBERON:0009618,2.56e-11,71;UBERON:0003077,3.86e-11,72;UBERON:0007285,3.86e-11,72;UBERON:0000490,4.61e-11,148;UBERON:0000486,1.44e-10,83;UBERON:0000119,1.00e-09,309;UBERON:0001134,2.38e-09,62;UBERON:0002036,2.38e-09,62;UBERON:0003082,2.38e-09,62;UBERON:0000483,3.05e-09,306;UBERON:0002385,4.72e-09,64;UBERON:0001015,4.72e-09,64;UBERON:0000383,4.72e-09,64;UBERON:0001048,2.53e-07,160;UBERON:0004923,2.94e-07,66;UBERON:0005156,7.64e-07,59;UBERON:0000990,7.64e-07,59;UBERON:0003102,9.76e-07,99 | |||
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| ||
|short_description=p2@TCTN3 | |||
}} | }} |
Latest revision as of 04:07, 20 September 2015
Short description: | p2@TCTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TCTN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000480852, ENST00000497399, uc009xux.1_5end |
EntrezGene: | TCTN3 |
HGNC: | 24519 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.65e-11 | 76 |
muscle precursor cell | 1.22e-10 | 58 |
myoblast | 1.22e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-10 | 58 |
mesodermal cell | 2.13e-10 | 121 |
embryonic cell | 5.10e-10 | 250 |
muscle cell | 7.77e-10 | 55 |
electrically responsive cell | 1.05e-08 | 61 |
electrically active cell | 1.05e-08 | 61 |
smooth muscle cell | 5.78e-08 | 43 |
smooth muscle myoblast | 5.78e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.01e-15 | 160 |
entire embryonic mesenchyme | 1.01e-15 | 160 |
trunk | 1.98e-13 | 199 |
trunk mesenchyme | 5.08e-12 | 122 |
dense mesenchyme tissue | 2.24e-11 | 73 |
epithelial vesicle | 2.45e-11 | 78 |
somite | 2.56e-11 | 71 |
presomitic mesoderm | 2.56e-11 | 71 |
presumptive segmental plate | 2.56e-11 | 71 |
dermomyotome | 2.56e-11 | 71 |
trunk paraxial mesoderm | 2.56e-11 | 71 |
paraxial mesoderm | 3.86e-11 | 72 |
presumptive paraxial mesoderm | 3.86e-11 | 72 |
unilaminar epithelium | 4.61e-11 | 148 |
multilaminar epithelium | 1.44e-10 | 83 |
cell layer | 1.00e-09 | 309 |
skeletal muscle tissue | 2.38e-09 | 62 |
striated muscle tissue | 2.38e-09 | 62 |
myotome | 2.38e-09 | 62 |
epithelium | 3.05e-09 | 306 |
muscle tissue | 4.72e-09 | 64 |
musculature | 4.72e-09 | 64 |
musculature of body | 4.72e-09 | 64 |
primordium | 2.53e-07 | 160 |
organ component layer | 2.94e-07 | 66 |
reproductive structure | 7.64e-07 | 59 |
reproductive system | 7.64e-07 | 59 |
surface structure | 9.76e-07 | 99 |