FFCP PHASE1:Hg19::chr17:39182993..39183030,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:39182993..39183030,-
|short_description=p2@KRTAP1-5
|description=CAGE_peak_2_at_KRTAP1-5_5end
|association_with_transcript=423bp_to_AJ406928,BC069533_5end...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83895 | |EntrezGene=83895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16777 | |HGNC=16777 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYS1 | |UniProt=Q9BYS1 | ||
|association_with_transcript=423bp_to_AJ406928,BC069533_5end | |||
|cluster_id=chr17:39182993..39183030,- | |||
|description=CAGE_peak_2_at_KRTAP1-5_5end | |||
|id=chr17:39182993..39183030,- | |||
|ontology_enrichment_celltype=CL:0000057!4.63e-33!75;CL:0002620!4.08e-25!23;CL:0000055!6.02e-19!180;CL:0002334!2.49e-14!12;CL:0000048!1.38e-12!430;CL:0000723!3.58e-12!436;CL:0000034!1.23e-11!444;CL:0000134!1.82e-10!358;CL:0002556!3.14e-10!6;CL:0002320!5.56e-10!365;CL:0000219!2.75e-08!390;CL:0002622!5.01e-08!3;CL:0002582!9.72e-08!3;CL:0002579!2.08e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002556;2.59e-11;6!CL:0000222;3.96e-08;1!CL:0002574;3.96e-08;1!CL:0002601;3.96e-08;1!CL:0002620;2.79e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,2.64e-11,6;CL:0000057,7.75e-11,76;CL:0002601,3.83e-08,1;CL:0002574,4.41e-08,1;CL:0002620,3.14e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.89e-07;10 | |||
|ontology_enrichment_disease=DOID:17!1.13e-11!5;DOID:450!1.13e-11!5;DOID:66!1.13e-11!5;DOID:423!1.13e-11!5;DOID:0080000!1.13e-11!5;DOID:11722!1.13e-11!5;DOID:0060084!4.88e-09!3;DOID:127!4.88e-09!3;DOID:0060072!7.79e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.55e-22;3!DOID:127;2.55e-22;3!DOID:0060072;6.88e-17;4!DOID:2513;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.30e-22,3;DOID:127,2.30e-22,3;DOID:0060072,6.37e-17,4;DOID:2513,1.05e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.99e-18!95;UBERON:0002097!2.02e-16!40;UBERON:0002199!9.23e-16!45;UBERON:0002416!9.23e-16!45;UBERON:0001758!3.14e-10!6;UBERON:0003672!3.14e-10!6;UBERON:0002384!6.99e-10!375;UBERON:0002118!8.67e-08!5;UBERON:0004532!8.67e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;2.59e-11;6!UBERON:0003672;2.59e-11;6!UBERON:0003129;9.14e-10;7!UBERON:0007029;3.96e-08;1!UBERON:0000014;5.34e-08;4!UBERON:0005631;7.19e-07;10!UBERON:0000158;7.19e-07;10!UBERON:0000995;7.32e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,2.64e-11,6;UBERON:0003672,2.64e-11,6;UBERON:0003102,4.75e-11,99;UBERON:0003129,9.29e-10,7;UBERON:0007029,2.50e-08,1;UBERON:0000014,4.26e-08,4;UBERON:0002097,1.99e-07,41 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.368502951935304,0,2.37600571456411,1.97813543422845,0,0,0.168336113954066,0,0.277064115484183,4.82875382968922,10.4205850571667,1.35214253015937,0,0.538168907066586,0.213557388818567,1.48352330811693,0.300091096084402,0.618315175430633,1.03056216018252,2.23340227597908,0.168776332241266,0.876933046450788,0.757301322732344,0.644349290496095,0.161646056818812,1.77504796258307,1.10827308050404,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6593811658487,1.04007436911366,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,1.96271887676878,0,0.35142424497814,0,0,0,0,0.553107505625109,1.30325421702124,0,0,0,0,0,0,0,0,0.992431231275107,0,0.561320188866147,0.256278298511402,0.511707249066704,0.482561763430822,0,0,0.532685175939381,0.328508624055237,0.519254429183621,1.16210378459959,0,0,0,0.34444334449382,0.910455840033585,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0,0,0,0,0,1.85938219718914,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50149902548784,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0.844430541190656,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,3.11431817566332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25799761052228,3.45688596480507,3.26587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0.554805861502613,0.378806010550178,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0.727394636810238,0.107410557042488,0.464033759878494,2.3885753321917,0,1.03018711554838,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.368502951935304,0,2.37600571456411,1.97813543422845,0,0,0.168336113954066,0,0.277064115484183,4.82875382968922,10.4205850571667,1.35214253015937,0,0.538168907066586,0.213557388818567,1.48352330811693,0.300091096084402,0.618315175430633,1.03056216018252,2.23340227597908,0.168776332241266,0.876933046450788,0.757301322732344,0.644349290496095,0.161646056818812,1.77504796258307,1.10827308050404,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6593811658487,1.04007436911366,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,1.96271887676878,0,0.35142424497814,0,0,0,0,0.553107505625109,1.30325421702124,0,0,0,0,0,0,0,0,0.992431231275107,0,0.561320188866147,0.256278298511402,0.511707249066704,0.482561763430822,0,0,0.532685175939381,0.328508624055237,0.519254429183621,1.16210378459959,0,0,0,0.34444334449382,0.910455840033585,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0,0,0,0,0,1.85938219718914,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50149902548784,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0.844430541190656,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,3.11431817566332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25799761052228,3.45688596480507,3.26587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0.554805861502613,0.378806010550178,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0.727394636810238,0.107410557042488,0.464033759878494,2.3885753321917,0,1.03018711554838,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@KRTAP1-5 | |||
}} | }} |
Latest revision as of 04:23, 20 September 2015
Short description: | p2@KRTAP1-5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRTAP1-5_5end |
Coexpression cluster: | NA |
Association with transcript: | 423bp_to_AJ406928, BC069533_5end |
EntrezGene: | KRTAP1-5 |
HGNC: | 16777 |
UniProt: | Q9BYS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 2.64e-11 | 6 |
fibroblast | 7.75e-11 | 76 |
uterine smooth muscle cell | 3.83e-08 | 1 |
stromal cell of pancreas | 4.41e-08 | 1 |
skin fibroblast | 3.14e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
periodontium | 2.64e-11 | 6 |
dentition | 2.64e-11 | 6 |
surface structure | 4.75e-11 | 99 |
skull | 9.29e-10 | 7 |
surface | 2.50e-08 | 1 |
zone of skin | 4.26e-08 | 4 |
skin of body | 1.99e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.30e-22 | 3 |
leiomyoma | 2.30e-22 | 3 |
benign neoplasm | 6.37e-17 | 4 |
basal cell carcinoma | 1.05e-08 | 1 |