FFCP PHASE1:Hg19::chr10:97803280..97803348,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:97803280..97803348,+
|short_description=p1@CCNJ
|description=CAGE_peak_1_at_CCNJ_5end
|association_with_transcript=0bp_to_ENST00000465148,ENST00000534974_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54619 | |EntrezGene=54619 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23434 | |HGNC=23434 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000465148,ENST00000534974_5end | |||
|cluster_id=chr10:97803280..97803348,+ | |||
|description=CAGE_peak_1_at_CCNJ_5end | |||
|id=chr10:97803280..97803348,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.70e-11!172;CL:0000566!1.70e-11!172;CL:0000763!3.80e-11!112;CL:0000049!3.80e-11!112;CL:0000988!1.67e-10!182;CL:0002139!3.81e-10!24;CL:0002032!6.26e-10!165;CL:0000837!6.26e-10!165;CL:0000066!3.30e-09!254;CL:0000557!4.50e-09!71;CL:0000012!4.88e-09!682;CL:0002009!5.98e-09!65;CL:0002194!7.90e-09!63;CL:0000576!7.90e-09!63;CL:0000040!7.90e-09!63;CL:0000559!7.90e-09!63;CL:0000115!9.33e-09!35;CL:0000548!2.24e-08!679;CL:0000004!2.24e-08!679;CL:0000255!2.24e-08!679;CL:0000839!2.77e-08!70;CL:0000860!2.89e-08!45;CL:0002057!3.15e-08!42;CL:0002319!7.30e-08!25;CL:0000071!1.06e-07!18;CL:0002546!1.06e-07!18;CL:0000063!1.09e-07!578;CL:0002087!1.69e-07!119;CL:0002078!4.14e-07!44;CL:0002031!8.58e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.19e-10;24!CL:0002319;5.88e-08;25!CL:0000071;1.61e-07;18!CL:0000115;3.21e-07;36!CL:0000576;8.88e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.45e-11,168;CL:0000763,2.56e-11,108;CL:0000049,2.56e-11,108;CL:0000988,1.68e-10,177;CL:0002139,3.81e-10,24;CL:0002032,5.47e-10,161;CL:0000837,5.47e-10,161;CL:0000557,2.47e-09,67;CL:0002009,3.07e-09,61;CL:0000066,3.90e-09,253;CL:0002194,3.99e-09,59;CL:0000576,3.99e-09,59;CL:0000040,3.99e-09,59;CL:0000559,3.99e-09,59;CL:0000115,1.01e-08,36;CL:0000839,1.63e-08,66;CL:0000860,3.15e-08,42;CL:0002057,3.15e-08,42;CL:0002319,7.30e-08,25;CL:0000071,1.06e-07,18;CL:0002546,1.06e-07,18;CL:0000473,1.40e-07,48;CL:0000234,1.40e-07,48;CL:0002087,1.42e-07,115;CL:0002078,4.06e-07,45;CL:0002031,7.56e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002546;1.61e-07;18 | |||
|ontology_enrichment_disease=DOID:162!2.50e-10!235;DOID:14566!1.17e-09!239;DOID:1240!1.91e-09!39;DOID:8692!1.33e-08!31;DOID:2531!1.55e-08!51;DOID:0060083!1.55e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.14e-08;31!DOID:1240;2.79e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.50e-10,235;DOID:14566,1.17e-09,239;DOID:1240,1.91e-09,39;DOID:8692,1.33e-08,31;DOID:2531,1.55e-08,51;DOID:0060083,1.55e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.06e-07!18;UBERON:0004638!1.06e-07!18;UBERON:0004852!1.06e-07!18;UBERON:0001474!7.04e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.61e-07;18!UBERON:0001986;1.61e-07;18!UBERON:0004852;1.61e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.06e-07,18;UBERON:0001986,1.06e-07,18;UBERON:0004852,1.06e-07,18;UBERON:0002405,5.24e-07,93;UBERON:0001474,5.30e-07,82;UBERON:0002371,9.98e-07,76 | |||
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| ||
|short_description=p1@CCNJ | |||
}} | }} |
Latest revision as of 04:24, 20 September 2015
Short description: | p1@CCNJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCNJ_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000465148, ENST00000534974_5end |
EntrezGene: | CCNJ |
HGNC: | 23434 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.45e-11 | 168 |
myeloid cell | 2.56e-11 | 108 |
common myeloid progenitor | 2.56e-11 | 108 |
hematopoietic cell | 1.68e-10 | 177 |
endothelial cell of vascular tree | 3.81e-10 | 24 |
hematopoietic oligopotent progenitor cell | 5.47e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.47e-10 | 161 |
granulocyte monocyte progenitor cell | 2.47e-09 | 67 |
macrophage dendritic cell progenitor | 3.07e-09 | 61 |
epithelial cell | 3.90e-09 | 253 |
monopoietic cell | 3.99e-09 | 59 |
monocyte | 3.99e-09 | 59 |
monoblast | 3.99e-09 | 59 |
promonocyte | 3.99e-09 | 59 |
endothelial cell | 1.01e-08 | 36 |
myeloid lineage restricted progenitor cell | 1.63e-08 | 66 |
classical monocyte | 3.15e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.15e-08 | 42 |
neural cell | 7.30e-08 | 25 |
blood vessel endothelial cell | 1.06e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.06e-07 | 18 |
defensive cell | 1.40e-07 | 48 |
phagocyte | 1.40e-07 | 48 |
nongranular leukocyte | 1.42e-07 | 115 |
meso-epithelial cell | 4.06e-07 | 45 |
hematopoietic lineage restricted progenitor cell | 7.56e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.06e-07 | 18 |
endothelium | 1.06e-07 | 18 |
cardiovascular system endothelium | 1.06e-07 | 18 |
immune system | 5.24e-07 | 93 |
bone element | 5.30e-07 | 82 |
bone marrow | 9.98e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.50e-10 | 235 |
disease of cellular proliferation | 1.17e-09 | 239 |
leukemia | 1.91e-09 | 39 |
myeloid leukemia | 1.33e-08 | 31 |
hematologic cancer | 1.55e-08 | 51 |
immune system cancer | 1.55e-08 | 51 |