FFCP PHASE1:Hg19::chr11:74022658..74022704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283208 | |EntrezGene=283208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30135 | |HGNC=30135 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z4N8,B4DUD3,E9PM97 | |UniProt=Q7Z4N8,B4DUD3,E9PM97 | ||
|association_with_transcript=0bp_to_ENST00000331597,ENST00000427714,ENST00000524388,ENST00000525968,NM_182904,uc001ouy.3,uc001ouz.2,uc010rrj.1_5end | |association_with_transcript=0bp_to_ENST00000331597,ENST00000427714,ENST00000524388,ENST00000525968,NM_182904,uc001ouy.3,uc001ouz.2,uc010rrj.1_5end | ||
|cluster_id=chr11:74022658..74022704,- | |||
|description=CAGE_peak_1_at_P4HA3_5end | |description=CAGE_peak_1_at_P4HA3_5end | ||
|id=chr11:74022658..74022704,- | |id=chr11:74022658..74022704,- | ||
|ontology_enrichment_celltype=CL:0000055!3.25e-31!180;CL:0000222!2.17e-27!119;CL:0000680!5.87e-19!57;CL:0000056!5.87e-19!57;CL:0000355!5.87e-19!57;CL:0000057!4.86e-18!75;CL:0000183!8.42e-18!59;CL:0000187!2.45e-17!54;CL:0000192!6.60e-15!42;CL:0000514!6.60e-15!42;CL:0000393!7.58e-15!60;CL:0000211!7.58e-15!60;CL:0002139!4.41e-13!24;CL:0000359!1.85e-12!32;CL:0000115!2.13e-12!35;CL:0002078!4.20e-11!44;CL:0000071!5.34e-11!18;CL:0002546!5.34e-11!18;CL:0000213!1.33e-10!57;CL:0000215!1.33e-10!57;CL:0000220!5.68e-08!246;CL:0002321!1.43e-07!248;CL:0002494!1.58e-07!16 | |ontology_enrichment_celltype=CL:0000055!3.25e-31!180;CL:0000222!2.17e-27!119;CL:0000680!5.87e-19!57;CL:0000056!5.87e-19!57;CL:0000355!5.87e-19!57;CL:0000057!4.86e-18!75;CL:0000183!8.42e-18!59;CL:0000187!2.45e-17!54;CL:0000192!6.60e-15!42;CL:0000514!6.60e-15!42;CL:0000393!7.58e-15!60;CL:0000211!7.58e-15!60;CL:0002139!4.41e-13!24;CL:0000359!1.85e-12!32;CL:0000115!2.13e-12!35;CL:0002078!4.20e-11!44;CL:0000071!5.34e-11!18;CL:0002546!5.34e-11!18;CL:0000213!1.33e-10!57;CL:0000215!1.33e-10!57;CL:0000220!5.68e-08!246;CL:0002321!1.43e-07!248;CL:0002494!1.58e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.00e-15;24!CL:0000359;1.76e-13;32!CL:0000071;6.76e-13;18!CL:0000192;9.23e-13;43!CL:0000115;9.33e-13;36!CL:0000187;8.16e-11;55!CL:0000134;1.28e-09;55!CL:0000723;3.81e-09;61!CL:0000048;8.32e-09;58!CL:0000057;9.50e-09;73!CL:0000393;1.63e-08;61!CL:0000211;1.63e-08;61!CL:0002078;1.90e-08;45!CL:0000213;4.22e-08;58!CL:0000215;4.22e-08;58!CL:0002494;4.40e-08;16!CL:1000413;2.66e-07;9!CL:0002334;5.23e-07;12!CL:0002320;7.51e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.94e-31,121;CL:0000680,7.22e-22,58;CL:0000056,7.22e-22,58;CL:0000355,7.22e-22,58;CL:0000187,6.21e-20,55;CL:0000057,8.32e-20,76;CL:0000192,1.62e-17,43;CL:0000514,1.62e-17,43;CL:0000393,1.15e-16,61;CL:0000211,1.15e-16,61;CL:0002139,1.87e-15,24;CL:0000115,4.46e-15,36;CL:0000048,5.19e-15,427;CL:0000359,3.47e-14,32;CL:0000723,5.68e-14,433;CL:0000071,6.09e-13,18;CL:0002546,6.09e-13,18;CL:0000034,1.17e-12,441;CL:0002078,1.52e-12,45;CL:0000213,2.68e-12,58;CL:0000215,2.68e-12,58;CL:0002494,4.30e-08,16;CL:1000413,2.39e-07,9;CL:0002334,5.12e-07,12;CL:0002321,9.82e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;6.76e-13;18!CL:0000514;9.23e-13;43!CL:0000355;8.18e-12;58!CL:0000222;6.37e-09;121 | |||
|ontology_enrichment_disease=DOID:2394!6.88e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.14e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.36e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.18e-28!79;UBERON:0007798!1.18e-28!79;UBERON:0000055!5.67e-26!69;UBERON:0004872!1.18e-25!84;UBERON:0001981!1.97e-24!60;UBERON:0007500!1.97e-24!60;UBERON:0004537!1.97e-24!60;UBERON:0006965!1.97e-24!60;UBERON:0003914!1.28e-22!118;UBERON:0004535!8.45e-22!110;UBERON:0001009!1.68e-21!113;UBERON:0005256!1.45e-20!143;UBERON:0000914!1.67e-20!83;UBERON:0002329!1.67e-20!83;UBERON:0003077!1.67e-20!83;UBERON:0003059!1.67e-20!83;UBERON:0007282!1.67e-20!83;UBERON:0009618!1.67e-20!83;UBERON:0007285!1.67e-20!83;UBERON:0004290!1.08e-19!70;UBERON:0002385!5.79e-19!63;UBERON:0001015!5.79e-19!63;UBERON:0000383!5.79e-19!63;UBERON:0000490!7.69e-19!138;UBERON:0001134!9.48e-19!61;UBERON:0002036!9.48e-19!61;UBERON:0003082!9.48e-19!61;UBERON:0001637!1.02e-17!42;UBERON:0003509!1.02e-17!42;UBERON:0004572!1.02e-17!42;UBERON:0000486!4.29e-17!82;UBERON:0000477!8.10e-16!286;UBERON:0000119!3.78e-15!312;UBERON:0002100!7.89e-15!216;UBERON:0000483!1.17e-14!309;UBERON:0004573!1.93e-14!33;UBERON:0004571!1.93e-14!33;UBERON:0004111!1.16e-13!241;UBERON:0000468!2.61e-13!659;UBERON:0000475!9.27e-12!365;UBERON:0003104!1.19e-11!238;UBERON:0009142!1.19e-11!238;UBERON:0000481!3.12e-11!347;UBERON:0001986!5.34e-11!18;UBERON:0004638!5.34e-11!18;UBERON:0004852!5.34e-11!18;UBERON:0000926!1.05e-10!448;UBERON:0004120!1.05e-10!448;UBERON:0006603!1.05e-10!448;UBERON:0000025!1.64e-10!194;UBERON:0000467!9.29e-10!625;UBERON:0000480!1.44e-09!626;UBERON:0000947!1.83e-09!21;UBERON:0010191!1.83e-09!21;UBERON:0000487!3.44e-09!22;UBERON:0006914!8.35e-09!25;UBERON:0000948!2.68e-07!24;UBERON:0005498!2.68e-07!24;UBERON:0004140!2.68e-07!24;UBERON:0009881!2.68e-07!24;UBERON:0004141!2.68e-07!24;UBERON:0003084!2.68e-07!24;UBERON:0007005!2.68e-07!24;UBERON:0004139!2.68e-07!24;UBERON:0004291!2.68e-07!24;UBERON:0007100!7.66e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.28e-16;42!UBERON:0003509;8.28e-16;42!UBERON:0004572;8.28e-16;42!UBERON:0007500;1.01e-15;56!UBERON:0001981;1.01e-15;56!UBERON:0004537;1.01e-15;56!UBERON:0004573;2.34e-15;33!UBERON:0004571;2.34e-15;33!UBERON:0000055;3.54e-15;65!UBERON:0004638;6.76e-13;18!UBERON:0001986;6.76e-13;18!UBERON:0004852;6.76e-13;18!UBERON:0002049;7.34e-12;75!UBERON:0007798;7.34e-12;75!UBERON:0000487;1.78e-10;22!UBERON:0000947;2.00e-10;21!UBERON:0010191;2.00e-10;21!UBERON:0006914;3.03e-10;25!UBERON:0003914;2.28e-09;74!UBERON:0002385;5.46e-08;31!UBERON:0001015;5.46e-08;31!UBERON:0000383;5.46e-08;31!UBERON:0004535;1.18e-07;109!UBERON:0003915;2.66e-07;9!UBERON:0004700;2.66e-07;9!UBERON:0001917;2.66e-07;9!UBERON:0002384;5.09e-07;198!UBERON:0001009;5.48e-07;112 | |||
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|short_description=p1@P4HA3 | |short_description=p1@P4HA3 | ||
}} | }} |
Latest revision as of 04:47, 20 September 2015
Short description: | p1@P4HA3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_P4HA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000331597, ENST00000427714, ENST00000524388, ENST00000525968, NM_182904, uc001ouy.3, uc001ouz.2, uc010rrj.1_5end |
EntrezGene: | P4HA3 |
HGNC: | 30135 |
UniProt: | Q7Z4N8B4DUD3E9PM97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.94e-31 | 121 |
muscle precursor cell | 7.22e-22 | 58 |
myoblast | 7.22e-22 | 58 |
multi-potent skeletal muscle stem cell | 7.22e-22 | 58 |
muscle cell | 6.21e-20 | 55 |
fibroblast | 8.32e-20 | 76 |
smooth muscle cell | 1.62e-17 | 43 |
smooth muscle myoblast | 1.62e-17 | 43 |
electrically responsive cell | 1.15e-16 | 61 |
electrically active cell | 1.15e-16 | 61 |
endothelial cell of vascular tree | 1.87e-15 | 24 |
endothelial cell | 4.46e-15 | 36 |
multi fate stem cell | 5.19e-15 | 427 |
vascular associated smooth muscle cell | 3.47e-14 | 32 |
somatic stem cell | 5.68e-14 | 433 |
blood vessel endothelial cell | 6.09e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.09e-13 | 18 |
stem cell | 1.17e-12 | 441 |
meso-epithelial cell | 1.52e-12 | 45 |
lining cell | 2.68e-12 | 58 |
barrier cell | 2.68e-12 | 58 |
cardiocyte | 4.30e-08 | 16 |
endothelial cell of artery | 2.39e-07 | 9 |
preadipocyte | 5.12e-07 | 12 |
embryonic cell | 9.82e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.36e-10 | 14 |