FFCP PHASE1:Hg19::chr11:74811565..74811576,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11309 | |EntrezGene=11309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10962 | |HGNC=10962 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_uc010rrp.1_5end | |association_with_transcript=25bp_to_uc010rrp.1_5end | ||
|cluster_id=chr11:74811565..74811576,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_9_at_SLCO2B1_5end | |description=CAGE_peak_9_at_SLCO2B1_5end | ||
|id=chr11:74811565..74811576,+ | |id=chr11:74811565..74811576,+ | ||
|ontology_enrichment_celltype=CL:0002274!5.08e-17!5;CL:0000457!5.08e-17!5;CL:0002191!5.08e-17!5;CL:0000097!5.08e-17!5;CL:0000831!5.08e-17!5;CL:0002028!5.08e-17!5;CL:0000163!3.04e-09!9;CL:0002032!1.03e-08!165;CL:0000837!1.03e-08!165;CL:0000763!1.41e-08!112;CL:0000049!1.41e-08!112;CL:0000037!4.45e-08!172;CL:0000566!4.45e-08!172;CL:0000235!1.22e-07!10;CL:0000988!2.93e-07!182 | |ontology_enrichment_celltype=CL:0002274!5.08e-17!5;CL:0000457!5.08e-17!5;CL:0002191!5.08e-17!5;CL:0000097!5.08e-17!5;CL:0000831!5.08e-17!5;CL:0002028!5.08e-17!5;CL:0000163!3.04e-09!9;CL:0002032!1.03e-08!165;CL:0000837!1.03e-08!165;CL:0000763!1.41e-08!112;CL:0000049!1.41e-08!112;CL:0000037!4.45e-08!172;CL:0000566!4.45e-08!172;CL:0000235!1.22e-07!10;CL:0000988!2.93e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.37e-63;5!CL:0000163;3.88e-35;9!CL:0000235;4.51e-19;6!CL:0000319;3.50e-14;1!CL:0000151;3.63e-11;36!CL:0000159;9.86e-08;2!CL:0002363;2.05e-07;2!CL:1000415;2.05e-07;2!CL:0000766;8.02e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.10e-63,5;CL:0002028,4.10e-63,5;CL:0000163,3.75e-35,9;CL:0000235,4.65e-19,6;CL:0000319,3.50e-14,1;CL:0000151,2.10e-12,36;CL:0000839,3.51e-11,66;CL:0000557,5.27e-11,67;CL:0000763,2.81e-10,108;CL:0000049,2.81e-10,108;CL:0000766,3.41e-10,72;CL:0000159,9.87e-08,2;CL:1000415,2.25e-07,2;CL:0002363,2.40e-07,2;CL:0000008,2.40e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;2.05e-07;2 | |||
|ontology_enrichment_disease=DOID:1036!2.03e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.03e-17;3!DOID:127;2.03e-17;3!DOID:3030;3.50e-14;1!DOID:0060072;2.58e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.64e-17,3;DOID:127,1.64e-17,3;DOID:3030,3.50e-14,1;DOID:0060072,2.21e-13,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;2.05e-07;2!UBERON:0001777;2.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.28e-09,76;UBERON:0001474,7.29e-09,82;UBERON:0004765,5.22e-08,90;UBERON:0002405,1.00e-07,93;UBERON:0003566,2.40e-07,2;UBERON:0001777,2.40e-07,2;UBERON:0002390,2.72e-07,98;UBERON:0003061,2.72e-07,98;UBERON:0001434,3.95e-07,100 | |||
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| ||
|short_description=p9@SLCO2B1 | |short_description=p9@SLCO2B1 | ||
}} | }} |
Latest revision as of 05:26, 20 September 2015
Short description: | p9@SLCO2B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLCO2B1_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 25bp_to_uc010rrp.1_5end |
EntrezGene: | SLCO2B1 |
HGNC: | 10962 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.10e-63 | 5 |
basophil mast progenitor cell | 4.10e-63 | 5 |
endocrine cell | 3.75e-35 | 9 |
macrophage | 4.65e-19 | 6 |
mucus secreting cell | 3.50e-14 | 1 |
secretory cell | 2.10e-12 | 36 |
myeloid lineage restricted progenitor cell | 3.51e-11 | 66 |
granulocyte monocyte progenitor cell | 5.27e-11 | 67 |
myeloid cell | 2.81e-10 | 108 |
common myeloid progenitor | 2.81e-10 | 108 |
myeloid leukocyte | 3.41e-10 | 72 |
seromucus secreting cell | 9.87e-08 | 2 |
epithelial cell of gall bladder | 2.25e-07 | 2 |
keratocyte | 2.40e-07 | 2 |
migratory cranial neural crest cell | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.28e-09 | 76 |
bone element | 7.29e-09 | 82 |
skeletal element | 5.22e-08 | 90 |
immune system | 1.00e-07 | 93 |
head connective tissue | 2.40e-07 | 2 |
substantia propria of cornea | 2.40e-07 | 2 |
hematopoietic system | 2.72e-07 | 98 |
blood island | 2.72e-07 | 98 |
skeletal system | 3.95e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.64e-17 | 3 |
leiomyoma | 1.64e-17 | 3 |
mucinous adenocarcinoma | 3.50e-14 | 1 |
benign neoplasm | 2.21e-13 | 4 |