FFCP PHASE1:Hg19::chr11:75236970..75237005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81544 | |EntrezGene=81544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28804 | |HGNC=28804 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WTR4 | |UniProt=Q8WTR4 | ||
|association_with_transcript=-22bp_to_ENST00000336898_5end | |association_with_transcript=-22bp_to_ENST00000336898_5end | ||
|cluster_id=chr11:75236970..75237005,- | |||
|description=CAGE_peak_2_at_GDPD5_5end | |description=CAGE_peak_2_at_GDPD5_5end | ||
|id=chr11:75236970..75237005,- | |id=chr11:75236970..75237005,- | ||
|ontology_enrichment_celltype=CL:0000071!9.41e-11!18;CL:0002546!9.41e-11!18;CL:0002139!1.50e-10!24;CL:0000115!4.77e-10!35;CL:0000213!3.36e-09!57;CL:0000215!3.36e-09!57;CL:0002078!1.29e-08!44 | |ontology_enrichment_celltype=CL:0000071!9.41e-11!18;CL:0002546!9.41e-11!18;CL:0002139!1.50e-10!24;CL:0000115!4.77e-10!35;CL:0000213!3.36e-09!57;CL:0000215!3.36e-09!57;CL:0002078!1.29e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0000071;9.57e-13;18!CL:0002139;7.73e-12;24!CL:0000115;7.28e-11;36!CL:0002078;3.33e-07;45!CL:0000213;3.57e-07;58!CL:0000215;3.57e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.27e-13,36;CL:0000071,2.60e-13,18;CL:0002546,2.60e-13,18;CL:0002139,2.62e-12,24;CL:0002078,1.11e-11,45;CL:0000213,3.25e-11,58;CL:0000215,3.25e-11,58;CL:1000413,4.11e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;9.57e-13;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.36e-12!115;UBERON:0001986!9.41e-11!18;UBERON:0004638!9.41e-11!18;UBERON:0004852!9.41e-11!18;UBERON:0006914!1.07e-08!25;UBERON:0000487!1.53e-08!22;UBERON:0003075!1.55e-08!86;UBERON:0007284!1.55e-08!86;UBERON:0005743!8.84e-08!86;UBERON:0002616!9.15e-08!59;UBERON:0000955!2.30e-07!69;UBERON:0006238!2.30e-07!69;UBERON:0001049!2.57e-07!57;UBERON:0005068!2.57e-07!57;UBERON:0006241!2.57e-07!57;UBERON:0007135!2.57e-07!57;UBERON:0000477!5.16e-07!286;UBERON:0002346!5.41e-07!90;UBERON:0001017!6.37e-07!82;UBERON:0004535!9.20e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.57e-13;18!UBERON:0001986;9.57e-13;18!UBERON:0004852;9.57e-13;18!UBERON:0006914;1.10e-10;25!UBERON:0000487;1.77e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.60e-13,18;UBERON:0001986,2.60e-13,18;UBERON:0004852,2.60e-13,18;UBERON:0006914,3.53e-11,25;UBERON:0000487,5.90e-11,22;UBERON:0007023,1.25e-10,114;UBERON:0000025,2.89e-07,192;UBERON:0003915,4.11e-07,9;UBERON:0004700,4.11e-07,9;UBERON:0001917,4.11e-07,9;UBERON:0001049,8.83e-07,56;UBERON:0005068,8.83e-07,56;UBERON:0006241,8.83e-07,56;UBERON:0007135,8.83e-07,56 | |||
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| ||
|short_description=p2@GDPD5 | |short_description=p2@GDPD5 | ||
}} | }} |
Latest revision as of 06:21, 20 September 2015
Short description: | p2@GDPD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GDPD5_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000336898_5end |
EntrezGene: | GDPD5 |
HGNC: | 28804 |
UniProt: | Q8WTR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.27e-13 | 36 |
blood vessel endothelial cell | 2.60e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.60e-13 | 18 |
endothelial cell of vascular tree | 2.62e-12 | 24 |
meso-epithelial cell | 1.11e-11 | 45 |
lining cell | 3.25e-11 | 58 |
barrier cell | 3.25e-11 | 58 |
endothelial cell of artery | 4.11e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.60e-13 | 18 |
endothelium | 2.60e-13 | 18 |
cardiovascular system endothelium | 2.60e-13 | 18 |
squamous epithelium | 3.53e-11 | 25 |
simple squamous epithelium | 5.90e-11 | 22 |
adult organism | 1.25e-10 | 114 |
tube | 2.89e-07 | 192 |
endothelial tube | 4.11e-07 | 9 |
arterial system endothelium | 4.11e-07 | 9 |
endothelium of artery | 4.11e-07 | 9 |
neural tube | 8.83e-07 | 56 |
neural rod | 8.83e-07 | 56 |
future spinal cord | 8.83e-07 | 56 |
neural keel | 8.83e-07 | 56 |