FFCP PHASE1:Hg19::chr17:39767709..39767719,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:39767709..39767719,- to FFCP PHASE1:Hg19::chr17:39767709..39767719,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3868 | |EntrezGene=3868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6423 | |HGNC=6423 | ||
|TSSclassifier=strong | |||
|UniProt=Q16195 | |UniProt=Q16195 | ||
|association_with_transcript=-30bp_to_S72493_5end | |||
|cluster_id=chr17:39767709..39767719,- | |||
|description=CAGE_peak_5_at_KRT16_5end | |||
|id=chr17:39767709..39767719,- | |||
|ontology_enrichment_celltype=CL:0000622!2.34e-27!5;CL:0002623!8.07e-26!3;CL:0000154!7.54e-23!6;CL:0002159!5.10e-16!13;CL:0000150!2.56e-15!9;CL:0002076!1.73e-11!43;CL:0000362!4.94e-10!8;CL:0002251!6.04e-10!21;CL:0002077!1.17e-08!33;CL:0000223!4.35e-08!59;CL:0000312!1.55e-07!5;CL:0000066!1.58e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000622;1.99e-32;5!CL:0000154;3.11e-27;6!CL:0000317;4.21e-21;2!CL:1000448;4.21e-21;2!CL:0002308;4.21e-21;2!CL:0002140;4.21e-21;2!CL:0000150;1.48e-18;9!CL:0002231;1.96e-14;3!CL:0002623;1.96e-14;3!CL:0000244;2.53e-11;4!CL:0000731;2.53e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.99e-32,5;CL:0000154,3.11e-27,6;CL:0000317,4.66e-21,2;CL:1000448,4.66e-21,2;CL:0002308,4.66e-21,2;CL:0002140,4.66e-21,2;CL:0000150,1.48e-18,9;CL:0002623,1.83e-14,3;CL:0002231,2.09e-14,3;CL:0000244,2.53e-11,4;CL:0000731,2.53e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.21e-21;2!UBERON:0010056;4.21e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!3.22e-13!6;UBERON:0003293!3.22e-13!6;UBERON:0003294!3.22e-13!6;UBERON:0010047!3.22e-13!6;UBERON:0000167!3.22e-13!6;UBERON:0000166!5.59e-10!21;UBERON:0006834!1.76e-09!1;UBERON:0000997!2.26e-09!1;UBERON:0005056!2.26e-09!1;UBERON:0001043!3.04e-09!4;UBERON:0009143!3.04e-09!4;UBERON:0000161!2.72e-08!35;UBERON:0003408!3.92e-08!10;UBERON:0000078!9.58e-08!18;UBERON:0000165!1.96e-07!28;UBERON:0000930!1.96e-07!28;UBERON:0003102!2.47e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;4.21e-21;2!UBERON:0007771;4.21e-21;2!UBERON:0003297;4.21e-21;2!UBERON:0001821;4.21e-21;2!UBERON:0003487;4.21e-21;2!UBERON:0001820;4.21e-21;2!UBERON:0001723;1.50e-14;3!UBERON:0001033;1.50e-14;3!UBERON:0000365;2.53e-09;5!UBERON:0005910;5.54e-08;6!UBERON:0001044;7.01e-08;6!UBERON:0003293;7.01e-08;6!UBERON:0003294;7.01e-08;6!UBERON:0010047;7.01e-08;6!UBERON:0003408;7.01e-08;6!UBERON:0000167;7.01e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,4.66e-21,2;UBERON:0007771,4.66e-21,2;UBERON:0003297,4.66e-21,2;UBERON:0001821,4.66e-21,2;UBERON:0003487,4.66e-21,2;UBERON:0001820,4.66e-21,2;UBERON:0005089,4.66e-21,2;UBERON:0005088,4.66e-21,2;UBERON:0001723,1.40e-14,3;UBERON:0001033,1.40e-14,3;UBERON:0010056,1.40e-14,3;UBERON:0000161,1.09e-10,36;UBERON:0000365,2.53e-09,5;UBERON:0000166,3.15e-08,22;UBERON:0005910,5.54e-08,6;UBERON:0001044,6.78e-08,6;UBERON:0003293,6.78e-08,6;UBERON:0003294,6.78e-08,6;UBERON:0010047,6.78e-08,6;UBERON:0000167,6.78e-08,6;UBERON:0003102,4.84e-07,99;UBERON:0002530,8.33e-07,59 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01289087829486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60024098414608,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36942951335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8303177226605,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01289087829486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60024098414608,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36942951335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8303177226605,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p5@KRT16 | |||
}} | }} |
Latest revision as of 06:24, 20 September 2015
Short description: | p5@KRT16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KRT16_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_S72493_5end |
EntrezGene: | KRT16 |
HGNC: | 6423 |
UniProt: | Q16195 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.99e-32 | 5 |
protein secreting cell | 3.11e-27 | 6 |
sebum secreting cell | 4.66e-21 | 2 |
epithelial cell of sweat gland | 4.66e-21 | 2 |
epithelial cell of skin gland | 4.66e-21 | 2 |
acinar cell of sebaceous gland | 4.66e-21 | 2 |
glandular epithelial cell | 1.48e-18 | 9 |
acinar cell of salivary gland | 1.83e-14 | 3 |
epithelial cell of prostate | 2.09e-14 | 3 |
transitional epithelial cell | 2.53e-11 | 4 |
urothelial cell | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
skin gland | 4.66e-21 | 2 |
epidermis gland | 4.66e-21 | 2 |
gland of integumental system | 4.66e-21 | 2 |
sebaceous gland | 4.66e-21 | 2 |
skin sebaceous gland | 4.66e-21 | 2 |
sweat gland | 4.66e-21 | 2 |
sweat gland placode | 4.66e-21 | 2 |
sebaceous gland placode | 4.66e-21 | 2 |
tongue | 1.40e-14 | 3 |
gustatory system | 1.40e-14 | 3 |
future tongue | 1.40e-14 | 3 |
orifice | 1.09e-10 | 36 |
urothelium | 2.53e-09 | 5 |
oral opening | 3.15e-08 | 22 |
transitional epithelium | 5.54e-08 | 6 |
saliva-secreting gland | 6.78e-08 | 6 |
gland of oral region | 6.78e-08 | 6 |
gland of foregut | 6.78e-08 | 6 |
oral gland | 6.78e-08 | 6 |
oral cavity | 6.78e-08 | 6 |
surface structure | 4.84e-07 | 99 |
gland | 8.33e-07 | 59 |