FFCP PHASE1:Hg19::chr14:52781513..52781533,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5732 | |EntrezGene=5732 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9594 | |HGNC=9594 | ||
|TSSclassifier=strong | |||
|UniProt=P43116 | |UniProt=P43116 | ||
|association_with_transcript=246bp_to_AY275471,X83868_5end | |association_with_transcript=246bp_to_AY275471,X83868_5end | ||
|cluster_id=chr14:52781513..52781533,+ | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_6_at_PTGER2_5end | |description=CAGE_peak_6_at_PTGER2_5end | ||
|id=chr14:52781513..52781533,+ | |id=chr14:52781513..52781533,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.92e-55!42;CL:0000860!2.97e-50!45;CL:0000738!7.20e-48!140;CL:0002087!2.21e-46!119;CL:0002031!3.46e-46!124;CL:0000766!1.25e-44!76;CL:0000557!5.78e-44!71;CL:0000839!5.06e-43!70;CL:0002009!2.41e-41!65;CL:0002194!2.66e-41!63;CL:0000576!2.66e-41!63;CL:0000040!2.66e-41!63;CL:0000559!2.66e-41!63;CL:0000037!2.47e-35!172;CL:0000566!2.47e-35!172;CL:0002032!6.59e-34!165;CL:0000837!6.59e-34!165;CL:0000988!4.44e-33!182;CL:0000763!9.24e-27!112;CL:0000049!9.24e-27!112;CL:0002320!1.30e-17!365;CL:0000134!3.20e-17!358;CL:0000791!5.59e-17!18;CL:0000789!5.59e-17!18;CL:0002420!5.59e-17!18;CL:0002419!5.59e-17!18;CL:0000790!5.59e-17!18;CL:0000048!1.24e-16!430;CL:0000723!5.64e-16!436;CL:0000034!8.58e-16!444;CL:0002393!3.65e-14!9;CL:0002397!3.65e-14!9;CL:0000219!7.64e-14!390;CL:0000084!6.67e-11!25;CL:0000827!6.67e-11!25;CL:0000625!1.32e-09!11;CL:0000624!4.84e-08!6;CL:0000003!9.30e-08!722;CL:0000838!2.61e-07!52;CL:0000542!4.57e-07!53;CL:0000051!4.57e-07!53 | |ontology_enrichment_celltype=CL:0002057!5.92e-55!42;CL:0000860!2.97e-50!45;CL:0000738!7.20e-48!140;CL:0002087!2.21e-46!119;CL:0002031!3.46e-46!124;CL:0000766!1.25e-44!76;CL:0000557!5.78e-44!71;CL:0000839!5.06e-43!70;CL:0002009!2.41e-41!65;CL:0002194!2.66e-41!63;CL:0000576!2.66e-41!63;CL:0000040!2.66e-41!63;CL:0000559!2.66e-41!63;CL:0000037!2.47e-35!172;CL:0000566!2.47e-35!172;CL:0002032!6.59e-34!165;CL:0000837!6.59e-34!165;CL:0000988!4.44e-33!182;CL:0000763!9.24e-27!112;CL:0000049!9.24e-27!112;CL:0002320!1.30e-17!365;CL:0000134!3.20e-17!358;CL:0000791!5.59e-17!18;CL:0000789!5.59e-17!18;CL:0002420!5.59e-17!18;CL:0002419!5.59e-17!18;CL:0000790!5.59e-17!18;CL:0000048!1.24e-16!430;CL:0000723!5.64e-16!436;CL:0000034!8.58e-16!444;CL:0002393!3.65e-14!9;CL:0002397!3.65e-14!9;CL:0000219!7.64e-14!390;CL:0000084!6.67e-11!25;CL:0000827!6.67e-11!25;CL:0000625!1.32e-09!11;CL:0000624!4.84e-08!6;CL:0000003!9.30e-08!722;CL:0000838!2.61e-07!52;CL:0000542!4.57e-07!53;CL:0000051!4.57e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-40;33!CL:0002057;2.04e-40;33!CL:0000576;9.82e-38;48!CL:0000473;7.37e-27;39!CL:0000234;7.37e-27;39!CL:0002393;8.44e-27;6!CL:0002397;8.44e-27;6!CL:0000766;7.69e-24;69!CL:0000767;1.30e-14;3!CL:0002087;1.25e-13;104!CL:0000763;6.24e-11;100!CL:0000738;2.29e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.05e-71,42;CL:0002057,1.05e-71,42;CL:0000473,6.16e-62,48;CL:0000234,6.16e-62,48;CL:0000766,3.48e-52,72;CL:0002194,2.95e-48,59;CL:0000576,2.95e-48,59;CL:0000040,2.95e-48,59;CL:0000559,2.95e-48,59;CL:0002009,1.72e-46,61;CL:0000839,7.18e-46,66;CL:0000557,4.25e-45,67;CL:0000738,1.16e-36,136;CL:0002087,2.31e-34,115;CL:0000763,1.42e-32,108;CL:0000049,1.42e-32,108;CL:0002393,1.60e-30,9;CL:0002397,1.60e-30,9;CL:0002031,2.17e-30,120;CL:0000037,3.36e-28,168;CL:0000988,2.28e-26,177;CL:0002032,4.17e-26,161;CL:0000837,4.17e-26,161;CL:0000767,9.72e-15,3;CL:0000134,3.32e-09,354;CL:0002320,7.14e-09,361;CL:0000219,1.05e-07,386;CL:0000034,4.37e-07,441;CL:0000048,6.20e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.06e-48;42!CL:0000049;2.26e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.70e-37!80;UBERON:0002390!7.79e-34!102;UBERON:0003061!7.79e-34!102;UBERON:0001474!2.91e-33!86;UBERON:0004765!1.42e-29!101;UBERON:0001434!1.42e-29!101;UBERON:0002193!3.95e-29!112;UBERON:0002405!6.36e-24!115;UBERON:0002204!3.84e-21!167;UBERON:0002384!2.24e-16!375;UBERON:0003081!7.63e-12!216 | |ontology_enrichment_uberon=UBERON:0002371!4.70e-37!80;UBERON:0002390!7.79e-34!102;UBERON:0003061!7.79e-34!102;UBERON:0001474!2.91e-33!86;UBERON:0004765!1.42e-29!101;UBERON:0001434!1.42e-29!101;UBERON:0002193!3.95e-29!112;UBERON:0002405!6.36e-24!115;UBERON:0002204!3.84e-21!167;UBERON:0002384!2.24e-16!375;UBERON:0003081!7.63e-12!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.75e-39,76;UBERON:0001474,9.55e-36,82;UBERON:0002390,1.16e-33,98;UBERON:0003061,1.16e-33,98;UBERON:0004765,5.08e-32,90;UBERON:0002405,8.70e-31,93;UBERON:0002193,6.21e-30,108;UBERON:0001434,3.41e-28,100;UBERON:0002204,1.12e-15,167;UBERON:0003081,6.06e-14,203;UBERON:0002384,2.03e-08,371 | |||
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|short_description=p6@PTGER2 | |short_description=p6@PTGER2 | ||
}} | }} |
Latest revision as of 06:33, 20 September 2015
Short description: | p6@PTGER2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PTGER2_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 246bp_to_AY275471, X83868_5end |
EntrezGene: | PTGER2 |
HGNC: | 9594 |
UniProt: | P43116 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.05e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-71 | 42 |
defensive cell | 6.16e-62 | 48 |
phagocyte | 6.16e-62 | 48 |
myeloid leukocyte | 3.48e-52 | 72 |
monopoietic cell | 2.95e-48 | 59 |
monocyte | 2.95e-48 | 59 |
monoblast | 2.95e-48 | 59 |
promonocyte | 2.95e-48 | 59 |
macrophage dendritic cell progenitor | 1.72e-46 | 61 |
myeloid lineage restricted progenitor cell | 7.18e-46 | 66 |
granulocyte monocyte progenitor cell | 4.25e-45 | 67 |
leukocyte | 1.16e-36 | 136 |
nongranular leukocyte | 2.31e-34 | 115 |
myeloid cell | 1.42e-32 | 108 |
common myeloid progenitor | 1.42e-32 | 108 |
intermediate monocyte | 1.60e-30 | 9 |
CD14-positive, CD16-positive monocyte | 1.60e-30 | 9 |
hematopoietic lineage restricted progenitor cell | 2.17e-30 | 120 |
hematopoietic stem cell | 3.36e-28 | 168 |
hematopoietic cell | 2.28e-26 | 177 |
hematopoietic oligopotent progenitor cell | 4.17e-26 | 161 |
hematopoietic multipotent progenitor cell | 4.17e-26 | 161 |
basophil | 9.72e-15 | 3 |
mesenchymal cell | 3.32e-09 | 354 |
connective tissue cell | 7.14e-09 | 361 |
motile cell | 1.05e-07 | 386 |
stem cell | 4.37e-07 | 441 |
multi fate stem cell | 6.20e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.75e-39 | 76 |
bone element | 9.55e-36 | 82 |
hematopoietic system | 1.16e-33 | 98 |
blood island | 1.16e-33 | 98 |
skeletal element | 5.08e-32 | 90 |
immune system | 8.70e-31 | 93 |
hemolymphoid system | 6.21e-30 | 108 |
skeletal system | 3.41e-28 | 100 |
musculoskeletal system | 1.12e-15 | 167 |
lateral plate mesoderm | 6.06e-14 | 203 |
connective tissue | 2.03e-08 | 371 |