FFCP PHASE1:Hg19::chr1:207224307..207224368,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55432 | |EntrezGene=55432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25035 | |HGNC=25035 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VVQ6 | |UniProt=Q5VVQ6 | ||
|association_with_transcript=0bp_to_AL833081_5end | |association_with_transcript=0bp_to_AL833081_5end | ||
|cluster_id=chr1:207224307..207224368,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_1_at_YOD1_5end | |description=CAGE_peak_1_at_YOD1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.51e-11!143;DOID:305!1.13e-10!106;DOID:162!3.69e-09!235;DOID:14566!2.32e-08!239 | |ontology_enrichment_disease=DOID:0050687!1.51e-11!143;DOID:305!1.13e-10!106;DOID:162!3.69e-09!235;DOID:14566!2.32e-08!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.49e-11,143;DOID:305,1.11e-10,106;DOID:162,3.60e-09,235;DOID:14566,2.30e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.46e-16!115;UBERON:0000073!4.20e-09!94;UBERON:0001016!4.20e-09!94;UBERON:0000178!4.66e-09!15;UBERON:0000179!4.66e-09!15;UBERON:0000463!4.66e-09!15;UBERON:0001017!1.44e-08!82;UBERON:0005743!2.06e-08!86;UBERON:0001049!2.14e-08!57;UBERON:0005068!2.14e-08!57;UBERON:0006241!2.14e-08!57;UBERON:0007135!2.14e-08!57;UBERON:0003080!4.82e-08!42;UBERON:0002780!1.17e-07!41;UBERON:0001890!1.17e-07!41;UBERON:0006240!1.17e-07!41;UBERON:0000955!6.55e-07!69;UBERON:0006238!6.55e-07!69;UBERON:0001893!9.38e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!3.46e-16!115;UBERON:0000073!4.20e-09!94;UBERON:0001016!4.20e-09!94;UBERON:0000178!4.66e-09!15;UBERON:0000179!4.66e-09!15;UBERON:0000463!4.66e-09!15;UBERON:0001017!1.44e-08!82;UBERON:0005743!2.06e-08!86;UBERON:0001049!2.14e-08!57;UBERON:0005068!2.14e-08!57;UBERON:0006241!2.14e-08!57;UBERON:0007135!2.14e-08!57;UBERON:0003080!4.82e-08!42;UBERON:0002780!1.17e-07!41;UBERON:0001890!1.17e-07!41;UBERON:0006240!1.17e-07!41;UBERON:0000955!6.55e-07!69;UBERON:0006238!6.55e-07!69;UBERON:0001893!9.38e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.67e-09;15!UBERON:0000179;4.67e-09;15!UBERON:0000463;4.67e-09;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.67e-09;15!UBERON:0000179;4.67e-09;15!UBERON:0000463;4.67e-09;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.54e-16,114;UBERON:0000178,4.66e-09,15;UBERON:0000179,4.66e-09,15;UBERON:0000463,4.66e-09,15;UBERON:0001016,6.34e-09,89;UBERON:0011216,8.42e-09,223;UBERON:0001017,3.06e-08,81;UBERON:0001049,4.92e-08,56;UBERON:0005068,4.92e-08,56;UBERON:0006241,4.92e-08,56;UBERON:0007135,4.92e-08,56;UBERON:0002780,1.17e-07,41;UBERON:0001890,1.17e-07,41;UBERON:0003080,1.17e-07,41;UBERON:0006240,1.17e-07,41;UBERON:0000073,4.13e-07,53;UBERON:0002616,4.13e-07,53;UBERON:0001893,9.38e-07,34 | |||
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| ||
|short_description=p1@YOD1 | |short_description=p1@YOD1 | ||
}} | }} |
Latest revision as of 07:00, 20 September 2015
Short description: | p1@YOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_YOD1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_AL833081_5end |
EntrezGene: | YOD1 |
HGNC: | 25035 |
UniProt: | Q5VVQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.54e-16 | 114 |
blood | 4.66e-09 | 15 |
haemolymphatic fluid | 4.66e-09 | 15 |
organism substance | 4.66e-09 | 15 |
nervous system | 6.34e-09 | 89 |
organ system subdivision | 8.42e-09 | 223 |
central nervous system | 3.06e-08 | 81 |
neural tube | 4.92e-08 | 56 |
neural rod | 4.92e-08 | 56 |
future spinal cord | 4.92e-08 | 56 |
neural keel | 4.92e-08 | 56 |
regional part of forebrain | 1.17e-07 | 41 |
forebrain | 1.17e-07 | 41 |
anterior neural tube | 1.17e-07 | 41 |
future forebrain | 1.17e-07 | 41 |
regional part of nervous system | 4.13e-07 | 53 |
regional part of brain | 4.13e-07 | 53 |
telencephalon | 9.38e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.49e-11 | 143 |
carcinoma | 1.11e-10 | 106 |
cancer | 3.60e-09 | 235 |
disease of cellular proliferation | 2.30e-08 | 239 |