FFCP PHASE1:Hg19::chr1:207226313..207226335,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:207226313..207226335,- to FFCP PHASE1:Hg19::chr1:207226313..207226335,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55432 | |EntrezGene=55432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25035 | |HGNC=25035 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VVQ6 | |UniProt=Q5VVQ6 | ||
|association_with_transcript=0bp_to_ENST00000367084,uc001hff.1_5end | |||
|cluster_id=chr1:207226313..207226335,- | |||
|description=CAGE_peak_4_at_YOD1_5end | |||
|id=chr1:207226313..207226335,- | |||
|ontology_enrichment_celltype=CL:0000066!6.11e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002591;4.84e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,7.55e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.37e-07;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.14e-18!143;DOID:305!2.15e-16!106;DOID:162!6.90e-15!235;DOID:14566!1.36e-14!239 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.37e-10;8!DOID:8692;4.23e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.89e-10,8;DOID:8692,6.92e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.87e-11!57;UBERON:0005068!1.87e-11!57;UBERON:0006241!1.87e-11!57;UBERON:0007135!1.87e-11!57;UBERON:0000073!3.08e-11!94;UBERON:0001016!3.08e-11!94;UBERON:0005743!4.51e-11!86;UBERON:0002616!2.32e-10!59;UBERON:0001017!2.75e-10!82;UBERON:0000955!2.77e-10!69;UBERON:0006238!2.77e-10!69;UBERON:0002346!2.99e-09!90;UBERON:0001737!3.05e-09!9;UBERON:0000924!4.78e-09!173;UBERON:0006601!4.78e-09!173;UBERON:0002780!1.61e-08!41;UBERON:0001890!1.61e-08!41;UBERON:0006240!1.61e-08!41;UBERON:0003075!1.63e-08!86;UBERON:0007284!1.63e-08!86;UBERON:0004121!2.11e-08!169;UBERON:0003080!4.15e-08!42;UBERON:0001893!1.20e-07!34;UBERON:0000064!1.61e-07!219;UBERON:0002020!2.87e-07!34;UBERON:0003528!2.87e-07!34;UBERON:0002791!3.94e-07!33;UBERON:0000033!6.57e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.70e-24;9!UBERON:0001557;5.70e-24;9!UBERON:0002336;4.84e-10;1!UBERON:0011215;4.84e-10;1!UBERON:0001018;4.84e-10;1!UBERON:0002473;4.84e-10;1!UBERON:0005340;4.84e-10;1!UBERON:0003544;4.84e-10;1!UBERON:0005970;4.84e-10;1!UBERON:0002316;4.84e-10;1!UBERON:0001020;4.84e-10;1!UBERON:0002437;4.84e-10;1!UBERON:0000072;2.21e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.34e-24,9;UBERON:0001557,6.37e-16,19;UBERON:0002336,2.84e-10,1;UBERON:0011215,2.84e-10,1;UBERON:0001018,2.84e-10,1;UBERON:0002473,2.84e-10,1;UBERON:0005340,2.84e-10,1;UBERON:0003544,2.84e-10,1;UBERON:0005970,2.84e-10,1;UBERON:0002316,2.84e-10,1;UBERON:0001020,2.84e-10,1;UBERON:0002437,2.84e-10,1;UBERON:0000072,2.49e-08,47;UBERON:0008947,7.84e-08,38;UBERON:0003258,7.84e-08,38;UBERON:0000065,3.76e-07,54 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0.314843125254717,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.0945348171640679,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.245668634623536,0.206651562351531,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0.169560592310488,0,0.818238361772504,0,0.609868530647977,0.265059536642971,0.464775771478074,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0.709840800239063,1.01150814046861,1.20505514941741,0.882351781859152,0.435758888184812,1.42362371466658,0.808987848960987,1.76599318612811,1.15424147083917,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,0,0.109750285408626,1.1240175325762,0.100528972411631,0,0.325808305310325,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.264145302039678,0.414656231081544,0.288239906833923,0.12624243342638,0.126995788584338,0,1.17217447210047,0,0.308482478109971,0.300343057843917,0.285826432630578,0.224262168690721,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0.909382714338778,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0.656029291399411,0,0,0.183138929636687,0.330037999682352,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,1.67043704337145,0,0.811367035427949,0.33307196799782,1.4098700508785,0.37428108081644,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0,0,0,0.984685914873589,0,0,0.211125408127993,0,0,0,0,0,0,0.179736702294654,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0.260427761085233,0.262379999988587,0,0.455173793141999,0.254253650292766,0.472775363535873,0.689486746482929,0,0,1.77148277162768,0.120596438625408,0,0.221158519862449,0,0,0.10893846351899,0.278847488557207,0,0.227884111694002,0.922255617552241,0.359030577639089,0.325942115766024,0,0.183195186803725,0,0,0.156980256395025,0,1.1279783030859,1.37243774022418,1.1747511088309,0,0.476809736941136,0.210998064528027,0.652931232636591,0,0.216388639742091,0,0,0,0,0,0.104421949505455,1.48282492557489,0,0.702793337176017,0,0.19566461893209,0,0,0,0,0.126373159256976,2.1045278718029,0.311064574191741,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0.677294319023596,0.877071805034227,0.903270027585302,0.193978032976839,0,0,0,0.19871461170299,0.50648636764703,0.391102765469606,0,0,0,0,0.114536596165916,0.343189995723929,0.14405479798815,0.124252535565433,0.235694034616795,0.271808412147228,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.236349546921671,0.164831716762333,0.202210631562555,0,0,0.795229689809303,1.36203406111576,0.482259445395058,0.412618309791701,0,0,0,0.182248669974074,0,0.0788057072991982,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0.340776043570843,0.226624183040251,0,0,0.129282956361551,0.79339561045614,0,0.704815022316672,0.106787412567695,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0.244052529803926,0.876336514945499,0.573409195690071,1.99672292766334,0.683060432355218,0.276697269872462,0.124980407962107,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0.71635536432595,0,0.219284049578707,0.176689145945881,0,0.337884881306145,1.02496607435179,0.690860683462397,0,0.829550616910385,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0.215649622793364,0.786329709279482,0.218419276384028,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0.205116364240755,0,0.345786262321089,0.645902582527404,0,0.196295437002051,0.471878893390961,0,0.346576998451015,0,0,0.198916222116275,0,0.20170506870352,0,0.261906694481422,0,0.591424344868181,0.472763092328763,0,0.413373593002368,0.253663240775627,0,0,0,0.351742488719241,0.127762427639595,0,0.336283722218824,0,0.455324382702595,0,0.115233987555779,0,0.271878931907327,0.263091094251396,0.472775363535873,0.333694205676207,0,0,0,0,0.647782773655864,0,0.214429632529969,0.316027223465453,0.23248285073625,0,0,0,0.3414369541879,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0.31020638566432,0,0.111855431797792,0,0.243835849964539,0,0,0,0,0.467878926924211,0.795803100645473,0.118920090777569,0.45178432815584,0.219881033490858,0.452888530700021,0,0.437119121007915,0,0,0,0.392616934229891,0.891139200981258,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.573358332605805,0,0.339957450954573,0,0,0,0,0,0.252332849670158,0.437062287854782,0.253397002022874,0.101988829741982,0.534434810531121,1.01084389488329,0,0.378893491091197,1.33982065078089,0,1.44806194206653,0,0,0.0645889098360061,0.124149428591716,0.112131862580613,0.12729431655633,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0.314843125254717,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.0945348171640679,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.245668634623536,0.206651562351531,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0.169560592310488,0,0.818238361772504,0,0.609868530647977,0.265059536642971,0.464775771478074,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0.709840800239063,1.01150814046861,1.20505514941741,0.882351781859152,0.435758888184812,1.42362371466658,0.808987848960987,1.76599318612811,1.15424147083917,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,0,0.109750285408626,1.1240175325762,0.100528972411631,0,0.325808305310325,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.264145302039678,0.414656231081544,0.288239906833923,0.12624243342638,0.126995788584338,0,1.17217447210047,0,0.308482478109971,0.300343057843917,0.285826432630578,0.224262168690721,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0.909382714338778,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0.656029291399411,0,0,0.183138929636687,0.330037999682352,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,1.67043704337145,0,0.811367035427949,0.33307196799782,1.4098700508785,0.37428108081644,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0,0,0,0.984685914873589,0,0,0.211125408127993,0,0,0,0,0,0,0.179736702294654,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0.260427761085233,0.262379999988587,0,0.455173793141999,0.254253650292766,0.472775363535873,0.689486746482929,0,0,1.77148277162768,0.120596438625408,0,0.221158519862449,0,0,0.10893846351899,0.278847488557207,0,0.227884111694002,0.922255617552241,0.359030577639089,0.325942115766024,0,0.183195186803725,0,0,0.156980256395025,0,1.1279783030859,1.37243774022418,1.1747511088309,0,0.476809736941136,0.210998064528027,0.652931232636591,0,0.216388639742091,0,0,0,0,0,0.104421949505455,1.48282492557489,0,0.702793337176017,0,0.19566461893209,0,0,0,0,0.126373159256976,2.1045278718029,0.311064574191741,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0.677294319023596,0.877071805034227,0.903270027585302,0.193978032976839,0,0,0,0.19871461170299,0.50648636764703,0.391102765469606,0,0,0,0,0.114536596165916,0.343189995723929,0.14405479798815,0.124252535565433,0.235694034616795,0.271808412147228,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.236349546921671,0.164831716762333,0.202210631562555,0,0,0.795229689809303,1.36203406111576,0.482259445395058,0.412618309791701,0,0,0,0.182248669974074,0,0.0788057072991982,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0.340776043570843,0.226624183040251,0,0,0.129282956361551,0.79339561045614,0,0.704815022316672,0.106787412567695,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0.244052529803926,0.876336514945499,0.573409195690071,1.99672292766334,0.683060432355218,0.276697269872462,0.124980407962107,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0.71635536432595,0,0.219284049578707,0.176689145945881,0,0.337884881306145,1.02496607435179,0.690860683462397,0,0.829550616910385,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0.215649622793364,0.786329709279482,0.218419276384028,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0.205116364240755,0,0.345786262321089,0.645902582527404,0,0.196295437002051,0.471878893390961,0,0.346576998451015,0,0,0.198916222116275,0,0.20170506870352,0,0.261906694481422,0,0.591424344868181,0.472763092328763,0,0.413373593002368,0.253663240775627,0,0,0,0.351742488719241,0.127762427639595,0,0.336283722218824,0,0.455324382702595,0,0.115233987555779,0,0.271878931907327,0.263091094251396,0.472775363535873,0.333694205676207,0,0,0,0,0.647782773655864,0,0.214429632529969,0.316027223465453,0.23248285073625,0,0,0,0.3414369541879,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0.31020638566432,0,0.111855431797792,0,0.243835849964539,0,0,0,0,0.467878926924211,0.795803100645473,0.118920090777569,0.45178432815584,0.219881033490858,0.452888530700021,0,0.437119121007915,0,0,0,0.392616934229891,0.891139200981258,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.573358332605805,0,0.339957450954573,0,0,0,0,0,0.252332849670158,0.437062287854782,0.253397002022874,0.101988829741982,0.534434810531121,1.01084389488329,0,0.378893491091197,1.33982065078089,0,1.44806194206653,0,0,0.0645889098360061,0.124149428591716,0.112131862580613,0.12729431655633,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p4@YOD1 | |||
}} | }} |
Latest revision as of 07:01, 20 September 2015
Short description: | p4@YOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_YOD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000367084, uc001hff.1_5end |
EntrezGene: | YOD1 |
HGNC: | 25035 |
UniProt: | Q5VVQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 7.55e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.34e-24 | 9 |
upper respiratory tract | 6.37e-16 | 19 |
corpus callosum | 2.84e-10 | 1 |
central nervous system cell part cluster | 2.84e-10 | 1 |
axon tract | 2.84e-10 | 1 |
intercerebral commissure | 2.84e-10 | 1 |
dorsal telencephalic commissure | 2.84e-10 | 1 |
brain white matter | 2.84e-10 | 1 |
brain commissure | 2.84e-10 | 1 |
white matter | 2.84e-10 | 1 |
nervous system commissure | 2.84e-10 | 1 |
cerebral hemisphere white matter | 2.84e-10 | 1 |
segment of respiratory tract | 2.49e-08 | 47 |
respiratory primordium | 7.84e-08 | 38 |
endoderm of foregut | 7.84e-08 | 38 |
respiratory tract | 3.76e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.89e-10 | 8 |
myeloid leukemia | 6.92e-07 | 31 |