FFCP PHASE1:Hg19::chr4:107237136..107237147,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9255 | |EntrezGene=9255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10648 | |HGNC=10648 | ||
|TSSclassifier=strong | |||
|UniProt=Q12904 | |UniProt=Q12904 | ||
|association_with_transcript=283bp_to_ENST00000358008,NM_004757,uc003hyg.2_5end | |association_with_transcript=283bp_to_ENST00000358008,NM_004757,uc003hyg.2_5end | ||
|cluster_id=chr4:107237136..107237147,+ | |||
|coexpression_cluster_id=C228 | |coexpression_cluster_id=C228 | ||
|description=CAGE_peak_10_at_AIMP1_5end | |description=CAGE_peak_10_at_AIMP1_5end | ||
|id=chr4:107237136..107237147,+ | |id=chr4:107237136..107237147,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.70e-07!4;CL:0002253!4.35e-07!2 | |ontology_enrichment_celltype=CL:0002563!1.70e-07!4;CL:0002253!4.35e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.26e-19;12!CL:0002253;6.43e-14;2!CL:0002561;1.29e-13;2!CL:0002563;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.26e-19,12;CL:0002253,6.43e-14,2;CL:0002561,1.21e-13,2;CL:0002563,1.31e-07,4;CL:0000223,2.54e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.65e-21;11!UBERON:0009497;6.07e-18;13!UBERON:0003104;3.21e-13;31!UBERON:0001041;3.64e-08;30 | |||
|ontology_enrichment_disease=DOID:17!1.91e-09!5;DOID:450!1.91e-09!5;DOID:66!1.91e-09!5;DOID:423!1.91e-09!5;DOID:0080000!1.91e-09!5;DOID:11722!1.91e-09!5 | |ontology_enrichment_disease=DOID:17!1.91e-09!5;DOID:450!1.91e-09!5;DOID:66!1.91e-09!5;DOID:423!1.91e-09!5;DOID:0080000!1.91e-09!5;DOID:11722!1.91e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.29e-13;2!DOID:3119;4.41e-08;14!DOID:7;9.60e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.37e-13,2;DOID:305,1.53e-08,106;DOID:3119,4.19e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003350!1.40e-09!5;UBERON:0001242!1.70e-07!4;UBERON:0001262!1.70e-07!4;UBERON:0004786!1.70e-07!4;UBERON:0004808!1.70e-07!4;UBERON:0001277!1.70e-07!4 | |ontology_enrichment_uberon=UBERON:0003350!1.40e-09!5;UBERON:0001242!1.70e-07!4;UBERON:0001262!1.70e-07!4;UBERON:0004786!1.70e-07!4;UBERON:0004808!1.70e-07!4;UBERON:0001277!1.70e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;1.29e-13;2!UBERON:0005942;1.29e-13;2!UBERON:0005932;1.29e-13;2!UBERON:0002107;1.64e-12;19!UBERON:0006925;1.64e-12;19!UBERON:0002423;1.13e-09;25!UBERON:0001052;1.31e-07;4!UBERON:0001242;1.31e-07;4!UBERON:0001262;1.31e-07;4!UBERON:0004786;1.31e-07;4!UBERON:0004808;1.31e-07;4!UBERON:0001277;1.31e-07;4!UBERON:0002365;2.24e-07;31!UBERON:0002330;2.24e-07;31!UBERON:0002368;5.57e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,1.21e-13,2;UBERON:0005942,1.21e-13,2;UBERON:0005932,1.21e-13,2;UBERON:0002107,1.64e-12,19;UBERON:0006925,1.64e-12,19;UBERON:0008836,1.64e-12,19;UBERON:0008835,6.70e-11,22;UBERON:0003894,6.70e-11,22;UBERON:0009854,1.86e-10,23;UBERON:0007499,1.13e-09,25;UBERON:0009497,1.13e-09,25;UBERON:0000015,1.13e-09,25;UBERON:0002423,1.13e-09,25;UBERON:0006235,1.13e-09,25;UBERON:0004161,1.13e-09,25;UBERON:0009856,2.52e-09,26;UBERON:0002365,6.38e-08,31;UBERON:0002330,6.38e-08,31;UBERON:0003929,7.73e-08,54;UBERON:0001052,1.31e-07,4;UBERON:0001242,1.31e-07,4;UBERON:0001262,1.31e-07,4;UBERON:0004786,1.31e-07,4;UBERON:0004808,1.31e-07,4;UBERON:0001277,1.31e-07,4;UBERON:0002368,4.39e-07,35 | |||
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| ||
|short_description=p10@AIMP1 | |short_description=p10@AIMP1 | ||
}} | }} |
Latest revision as of 07:06, 20 September 2015
Short description: | p10@AIMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_AIMP1_5end |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | 283bp_to_ENST00000358008, NM_004757, uc003hyg.2_5end |
EntrezGene: | AIMP1 |
HGNC: | 10648 |
UniProt: | Q12904 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.26e-19 | 12 |
epithelial cell of large intestine | 6.43e-14 | 2 |
outer root sheath cell | 1.21e-13 | 2 |
intestinal epithelial cell | 1.31e-07 | 4 |
endodermal cell | 2.54e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 1.21e-13 | 2 |
hair outer root sheath | 1.21e-13 | 2 |
bulb of hair follicle | 1.21e-13 | 2 |
liver | 1.64e-12 | 19 |
digestive gland | 1.64e-12 | 19 |
liver bud | 1.64e-12 | 19 |
hepatic diverticulum | 6.70e-11 | 22 |
liver primordium | 6.70e-11 | 22 |
digestive tract diverticulum | 1.86e-10 | 23 |
epithelial sac | 1.13e-09 | 25 |
epithelium of foregut-midgut junction | 1.13e-09 | 25 |
anatomical boundary | 1.13e-09 | 25 |
hepatobiliary system | 1.13e-09 | 25 |
foregut-midgut junction | 1.13e-09 | 25 |
septum transversum | 1.13e-09 | 25 |
sac | 2.52e-09 | 26 |
exocrine gland | 6.38e-08 | 31 |
exocrine system | 6.38e-08 | 31 |
gut epithelium | 7.73e-08 | 54 |
rectum | 1.31e-07 | 4 |
intestinal mucosa | 1.31e-07 | 4 |
wall of intestine | 1.31e-07 | 4 |
gastrointestinal system mucosa | 1.31e-07 | 4 |
gastrointestinal system epithelium | 1.31e-07 | 4 |
intestinal epithelium | 1.31e-07 | 4 |
endocrine gland | 4.39e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.37e-13 | 2 |
carcinoma | 1.53e-08 | 106 |
gastrointestinal system cancer | 4.19e-08 | 14 |