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FFCP PHASE1:Hg19::chr16:1203194..1203207,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=8912
|EntrezGene=8912
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=1395
|HGNC=1395
|TSSclassifier=strong
|UniProt=O95180,B3KQH9
|UniProt=O95180,B3KQH9
|association_with_transcript=-33bp_to_ENST00000348261,ENST00000358590,NM_001005407,NM_021098,uc002cks.2,uc002ckt.2_5end
|association_with_transcript=-33bp_to_ENST00000348261,ENST00000358590,NM_001005407,NM_021098,uc002cks.2,uc002ckt.2_5end
|cluster_id=chr16:1203194..1203207,+
|coexpression_cluster_id=C1
|coexpression_cluster_id=C1
|description=CAGE_peak_3_at_CACNA1H_5end
|description=CAGE_peak_3_at_CACNA1H_5end
|id=chr16:1203194..1203207,+
|id=chr16:1203194..1203207,+
|ontology_enrichment_celltype=CL:0000511!9.92e-13!1;CL:0002625!9.92e-13!1;CL:0000216!9.92e-13!1;CL:0000154!1.67e-08!6;CL:0000317!5.73e-07!2;CL:1000448!5.73e-07!2;CL:0002308!5.73e-07!2;CL:0002140!5.73e-07!2;CL:0002363!6.42e-07!2;CL:0000008!6.42e-07!2
|ontology_enrichment_celltype=CL:0000511!9.92e-13!1;CL:0002625!9.92e-13!1;CL:0000216!9.92e-13!1;CL:0000154!1.67e-08!6;CL:0000317!5.73e-07!2;CL:1000448!5.73e-07!2;CL:0002308!5.73e-07!2;CL:0002140!5.73e-07!2;CL:0002363!6.42e-07!2;CL:0000008!6.42e-07!2
|ontology_enrichment_celltype_v019=CL:0000511;6.58e-50;1!CL:0002625;6.58e-50;1!CL:0000216;6.58e-50;1!CL:0000154;1.57e-09;6
|ontology_enrichment_celltype_v019_2=CL:0000511,6.58e-50,1;CL:0002625,6.58e-50,1;CL:0000216,6.58e-50,1;CL:0000154,1.57e-09,6
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000473!1.79e-13!8;UBERON:0001136!9.92e-13!1;UBERON:0001343!9.92e-13!1;UBERON:0004910!9.92e-13!1;UBERON:0005154!9.92e-13!1;UBERON:0005295!9.92e-13!1;UBERON:0004813!9.92e-13!1;UBERON:0005297!9.92e-13!1;UBERON:0005294!9.92e-13!1;UBERON:0010141!9.92e-13!1;UBERON:0005891!9.92e-13!1;UBERON:0003135!5.99e-10!11;UBERON:0003101!1.84e-08!22;UBERON:0000079!1.84e-08!22;UBERON:0004122!3.36e-07!15;UBERON:0004909!5.41e-07!2;UBERON:0002419!5.73e-07!2;UBERON:0007771!5.73e-07!2;UBERON:0003297!5.73e-07!2;UBERON:0001821!5.73e-07!2;UBERON:0003487!5.73e-07!2;UBERON:0001820!5.73e-07!2;UBERON:0005089!5.73e-07!2;UBERON:0005088!5.73e-07!2;UBERON:0003566!6.42e-07!2;UBERON:0001777!6.42e-07!2;UBERON:0000341!6.80e-07!2;UBERON:0002360!7.20e-07!2;UBERON:0000094!7.20e-07!2;UBERON:0007645!7.20e-07!2;UBERON:0001255!9.54e-07!2;UBERON:0001556!9.54e-07!2
|ontology_enrichment_uberon=UBERON:0000473!1.79e-13!8;UBERON:0001136!9.92e-13!1;UBERON:0001343!9.92e-13!1;UBERON:0004910!9.92e-13!1;UBERON:0005154!9.92e-13!1;UBERON:0005295!9.92e-13!1;UBERON:0004813!9.92e-13!1;UBERON:0005297!9.92e-13!1;UBERON:0005294!9.92e-13!1;UBERON:0010141!9.92e-13!1;UBERON:0005891!9.92e-13!1;UBERON:0003135!5.99e-10!11;UBERON:0003101!1.84e-08!22;UBERON:0000079!1.84e-08!22;UBERON:0004122!3.36e-07!15;UBERON:0004909!5.41e-07!2;UBERON:0002419!5.73e-07!2;UBERON:0007771!5.73e-07!2;UBERON:0003297!5.73e-07!2;UBERON:0001821!5.73e-07!2;UBERON:0003487!5.73e-07!2;UBERON:0001820!5.73e-07!2;UBERON:0005089!5.73e-07!2;UBERON:0005088!5.73e-07!2;UBERON:0003566!6.42e-07!2;UBERON:0001777!6.42e-07!2;UBERON:0000341!6.80e-07!2;UBERON:0002360!7.20e-07!2;UBERON:0000094!7.20e-07!2;UBERON:0007645!7.20e-07!2;UBERON:0001255!9.54e-07!2;UBERON:0001556!9.54e-07!2
|ontology_enrichment_uberon_v019=UBERON:0000473;5.52e-56;8!UBERON:0001136;6.58e-50;1!UBERON:0001343;6.58e-50;1!UBERON:0004910;6.58e-50;1!UBERON:0004813;6.58e-50;1!UBERON:0003135;4.67e-41;11!UBERON:0004909;9.18e-26;2!UBERON:0000991;4.76e-22;21!UBERON:0003101;4.27e-21;22!UBERON:0000079;4.27e-21;22!UBERON:0005904;1.29e-13;4!UBERON:0002323;2.66e-08;45!UBERON:0003133;4.05e-08;44
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.52e-56,8;UBERON:0001136,6.58e-50,1;UBERON:0001343,6.58e-50,1;UBERON:0004910,6.58e-50,1;UBERON:0005154,6.58e-50,1;UBERON:0005295,6.58e-50,1;UBERON:0004813,6.58e-50,1;UBERON:0005297,6.58e-50,1;UBERON:0005294,6.58e-50,1;UBERON:0010141,6.58e-50,1;UBERON:0005891,6.58e-50,1;UBERON:0003135,4.67e-41,11;UBERON:0004909,9.18e-26,2;UBERON:0000991,4.76e-22,21;UBERON:0009196,4.76e-22,21;UBERON:0009117,4.76e-22,21;UBERON:0005564,4.76e-22,21;UBERON:0004176,4.27e-21,22;UBERON:0003101,4.27e-21,22;UBERON:0000079,4.27e-21,22;UBERON:0005904,1.29e-13,4;UBERON:0002323,1.35e-10,46;UBERON:0003133,3.42e-10,48;UBERON:0004458,5.30e-10,49;UBERON:0003886,3.71e-09,54;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59;UBERON:0002553,3.34e-08,61;UBERON:0004871,1.80e-07,8
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|short_description=p3@CACNA1H
|short_description=p3@CACNA1H
}}
}}

Latest revision as of 07:40, 20 September 2015

Short description:p3@CACNA1H
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_CACNA1H_5end
Coexpression cluster:C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate
Association with transcript: -33bp_to_ENST00000348261, ENST00000358590, NM_001005407, NM_021098, uc002cks.2, uc002ckt.2_5end
EntrezGene:CACNA1H
HGNC: 1395
UniProt: O95180B3KQH9
Genome view:ZENBU


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CAGE Expression



0.0
2.5
5.0
7.5
10.0
12.5
15.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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