Personal tools

FFCP PHASE1:Hg19::chr7:98972311..98972326,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DPIdataset=robustDPI
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=10095
|EntrezGene=10095
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=704
|HGNC=704
|TSSclassifier=S
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-2bp_to_ENST00000484600,uc003upz.2_5end
|association_with_transcript=-2bp_to_ENST00000484600,uc003upz.2_5end
|cluster_id=chr7:98972311..98972326,+
|coexpression_cluster_id=C4710
|coexpression_cluster_id=C4710
|description=CAGE_peak_2_at_ARPC1B_5end
|description=CAGE_peak_2_at_ARPC1B_5end

Latest revision as of 08:49, 20 September 2015

Short description:p2@ARPC1B
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_ARPC1B_5end
Coexpression cluster:C4710_Monocytederived_Mesenchymal_Macrophage_papillotubular_Dendritic_Alveolar_CD14CD16
Association with transcript: -2bp_to_ENST00000484600, uc003upz.2_5end
EntrezGene:ARPC1B
HGNC: 704
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
50
100
150
200
250




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data