FFCP PHASE1:Hg19::chr11:78285804..78285925,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:78285804..78285925,-
|short_description=p1@NARS2
|description=CAGE_peak_1_at_NARS2_5end
|association_with_transcript=0bp_to_ENST00000281038,ENST0000052957...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79731 | |EntrezGene=79731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26274 | |HGNC=26274 | ||
|TSSclassifier=strong | |||
|UniProt=Q96I59,B3KPX5,G3V178,Q9H5H1 | |UniProt=Q96I59,B3KPX5,G3V178,Q9H5H1 | ||
|association_with_transcript=0bp_to_ENST00000281038,ENST00000529571,NM_001243251,NM_024678,uc001ozi.2,uc010rsq.1_5end | |||
|cluster_id=chr11:78285804..78285925,- | |||
|description=CAGE_peak_1_at_NARS2_5end | |||
|id=chr11:78285804..78285925,- | |||
|ontology_enrichment_celltype=CL:0000066!1.75e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.13e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.87e-32!235;DOID:14566!7.27e-31!239;DOID:0050687!4.36e-19!143;DOID:305!1.22e-15!106;DOID:0050686!2.85e-13!137;DOID:2531!4.12e-13!51;DOID:0060083!4.12e-13!51;DOID:1240!1.13e-11!39;DOID:8692!2.19e-09!31;DOID:3095!1.55e-07!22;DOID:2994!1.55e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.91e-09;39!DOID:8692;4.91e-09;31!DOID:2531;1.75e-08;51!DOID:0060083;1.75e-08;51!DOID:3095;1.73e-07;22!DOID:2994;1.73e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.87e-32,235;DOID:14566,7.26e-31,239;DOID:0050687,4.36e-19,143;DOID:305,1.22e-15,106;DOID:0050686,2.85e-13,137;DOID:2531,4.12e-13,51;DOID:0060083,4.12e-13,51;DOID:1240,1.13e-11,39;DOID:8692,2.19e-09,31;DOID:3095,1.55e-07,22;DOID:2994,1.55e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.08e-07!155;UBERON:0001555!3.08e-07!155;UBERON:0007026!3.08e-07!155;UBERON:0001737!3.84e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.69e-07;9!UBERON:0001557;3.69e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,4.69e-09,223;UBERON:0001737,3.84e-07,9;UBERON:0001007,6.13e-07,145;UBERON:0001555,6.13e-07,145;UBERON:0007026,6.13e-07,145 | |||
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| ||
|short_description=p1@NARS2 | |||
}} | }} |
Latest revision as of 15:51, 24 September 2015
Short description: | p1@NARS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NARS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000281038, ENST00000529571, NM_001243251, NM_024678, uc001ozi.2, uc010rsq.1_5end |
EntrezGene: | NARS2 |
HGNC: | 26274 |
UniProt: | Q96I59B3KPX5G3V178Q9H5H1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.13e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 4.69e-09 | 223 |
larynx | 3.84e-07 | 9 |
digestive system | 6.13e-07 | 145 |
digestive tract | 6.13e-07 | 145 |
primitive gut | 6.13e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.87e-32 | 235 |
disease of cellular proliferation | 7.26e-31 | 239 |
cell type cancer | 4.36e-19 | 143 |
carcinoma | 1.22e-15 | 106 |
organ system cancer | 2.85e-13 | 137 |
hematologic cancer | 4.12e-13 | 51 |
immune system cancer | 4.12e-13 | 51 |
leukemia | 1.13e-11 | 39 |
myeloid leukemia | 2.19e-09 | 31 |
germ cell and embryonal cancer | 1.55e-07 | 22 |
germ cell cancer | 1.55e-07 | 22 |