FFCP PHASE1:Hg19::chr11:101981327..101981348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10413 | |EntrezGene=10413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16262 | |HGNC=16262 | ||
|TSSclassifier=strong | |||
|UniProt=P46937,F5GWC5,F5H202 | |UniProt=P46937,F5GWC5,F5H202 | ||
|association_with_transcript=117bp_to_ENST00000345877,ENST00000445250,ENST00000537274,uc001pgs.2,uc001pgt.2,uc001pgu.2,uc001pgv.2_5end | |association_with_transcript=117bp_to_ENST00000345877,ENST00000445250,ENST00000537274,uc001pgs.2,uc001pgt.2,uc001pgu.2,uc001pgv.2_5end | ||
|cluster_id=chr11:101981327..101981348,+ | |||
|coexpression_cluster_id=C2089 | |coexpression_cluster_id=C2089 | ||
|description=CAGE_peak_7_at_YAP1_5end | |description=CAGE_peak_7_at_YAP1_5end | ||
|id=chr11:101981327..101981348,+ | |id=chr11:101981327..101981348,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.70e-10!180;CL:0000066!6.39e-08!254;CL:0000057!8.39e-08!75 | |ontology_enrichment_celltype=CL:0000055!1.70e-10!180;CL:0000066!6.39e-08!254;CL:0000057!8.39e-08!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.54e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.81e-07!143 | |ontology_enrichment_disease=DOID:0050687!6.81e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!6.59e-13!238;UBERON:0009142!6.59e-13!238;UBERON:0004119!3.79e-12!169;UBERON:0000925!3.79e-12!169;UBERON:0006595!3.79e-12!169;UBERON:0001007!2.21e-11!155;UBERON:0001555!2.21e-11!155;UBERON:0007026!2.21e-11!155;UBERON:0000481!9.73e-11!347;UBERON:0000468!1.19e-10!659;UBERON:0000077!7.23e-10!130;UBERON:0003102!8.53e-09!95;UBERON:0004923!9.22e-09!57;UBERON:0002100!1.29e-08!216;UBERON:0004921!3.47e-08!129;UBERON:0004185!3.47e-08!129;UBERON:0001737!1.12e-07!9;UBERON:0000161!4.14e-07!35;UBERON:0000475!7.05e-07!365;UBERON:0005156!8.10e-07!59;UBERON:0000990!8.10e-07!59;UBERON:0000062!9.42e-07!511;UBERON:0000467!9.86e-07!625 | |ontology_enrichment_uberon=UBERON:0003104!6.59e-13!238;UBERON:0009142!6.59e-13!238;UBERON:0004119!3.79e-12!169;UBERON:0000925!3.79e-12!169;UBERON:0006595!3.79e-12!169;UBERON:0001007!2.21e-11!155;UBERON:0001555!2.21e-11!155;UBERON:0007026!2.21e-11!155;UBERON:0000481!9.73e-11!347;UBERON:0000468!1.19e-10!659;UBERON:0000077!7.23e-10!130;UBERON:0003102!8.53e-09!95;UBERON:0004923!9.22e-09!57;UBERON:0002100!1.29e-08!216;UBERON:0004921!3.47e-08!129;UBERON:0004185!3.47e-08!129;UBERON:0001737!1.12e-07!9;UBERON:0000161!4.14e-07!35;UBERON:0000475!7.05e-07!365;UBERON:0005156!8.10e-07!59;UBERON:0000990!8.10e-07!59;UBERON:0000062!9.42e-07!511;UBERON:0000467!9.86e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.19e-08;9!UBERON:0001557;1.19e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.20e-09,160;UBERON:0000925,1.20e-09,160;UBERON:0006595,1.20e-09,160;UBERON:0001007,1.64e-09,145;UBERON:0001555,1.64e-09,145;UBERON:0007026,1.64e-09,145;UBERON:0004923,9.98e-09,66;UBERON:0001737,1.91e-08,9;UBERON:0003102,7.02e-08,99;UBERON:0004921,6.26e-07,118 | |||
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|phase1_expression=3.45188920614058,3.63970890614671,5.63817616383885,7.00513088471913,3.5756887554183,4.36169262050184,0,0,1.04474251279935,1.72013755551056,0.697801167972428,2.40285509343189,1.84636884759917,0.495065411840187,0.331397375727916,0.672325146451775,0,1.46062018077475,0.975865597581014,0.984968464614303,1.02000345622126,0.626909442956176,0.85870796139317,1.64249310087461,1.12988375635323,0,0,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.2786256184353,1.44575660953827,1.50401373190767,2.462390822334,2.3858578411533,1.45990461090791,0.756278537312543,0.221729397462564,0.87834785693126,0.982343066232845,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0.79504962946682,0,1.04142150482278,1.13061588384802,0.419499436209906,1.10047216776027,0.417989933073621,0.258416759169329,0.71153252537342,0.33472061276467,2.01414658554573,1.52054421143703,2.4406205754817,0.367663080345869,0,0.357198913136319,1.12264686313085,1.12611480483322,0,0.949265659568129,0.183201743930407,0,0,1.3082821564276,3.47880366186723,1.8994576749687,1.05927344650575,1.14734648299525,2.4826786753885,1.12135520028461,1.06748995729705,1.48000529050296,3.42332138939743,1.88594940897563,1.9615428373615,1.51357427644931,1.15235184896,1.40592859100278,0.936480230490962,1.71141546463335,1.19558944441441,1.87895197830024,1.61872944368132,3.51127016755621,1.63323337003915,1.84251475967652,1.23990937410919,1.18800285728205,0.494533858557114,1.82032272387605,0,1.85169725349473,1.87677779807946,2.49357703935765,2.63386572528503,2.75839016219118,1.80285670687916,0.794025282120147,1.61450672119976,1.92201649936711,2.96704661623387,1.20036438433761,1.13357782162283,0.515281080091258,1.11670113798954,0.675105328965065,2.14361411354637,1.26216887122057,2.39329736469978,1.77810662500693,1.42003837006646,2.31729825923573,1.01736355386293,2.31913023795956,1.09098448236334,2.00763216772303,1.95157929807353,1.59035721985782,1.85910308591229,1.96956004529204,1.7662459561294,1.09493207722749,3.12899064659632,1.92972281457866,0,0.928735856063958,2.16563844500876,8.99131680302814,8.59781919398319,8.67639707580535,8.71322384585912,11.1118516487127,10.4399072408883,7.14605933248871,8.04508007013919,8.84918460976698,1.4763109092493,0,0.8231480226628,0,0,0.982827216677626,0.590789906681404,0,1.59884970106048,0.514703430895577,1.31700342490351,2.24803506515239,0.804231779293047,1.75918045801206,0.977424915930974,0,0,0.463721619900307,1.40890433082986,0.288732895522148,1.85194205030644,1.52203321787679,0,0,0,0,0,0,1.34385702559088,1.27597587518148,2.50763863567975,1.74380363108377,1.15014803749563,0,0,0,0,0.12624243342638,0.380987365753014,1.14596527667483,1.17217447210047,1.71072446022705,0.308482478109971,0.901029173531752,1.42913216315289,1.34557301214433,1.74384027533312,1.466765716419,2.19761916788222,0,0,2.12750493267896,1.04007436911366,1.80045161983499,2.83698264046557,0.532844358032199,1.14382394926518,1.08524321078289,0.823240336780769,0.977208552881205,0.710783897485092,0.791951872933429,1.50719688529793,3.48613383440118,2.0994328148232,0,0,0,2.39624855491583,4.59447743336456,0,1.01346914667305,1.43833425785268,2.50685348535854,0,0,0,0,1.01637849688985,0,0.773288812777695,0,0.637938751653163,0,0,0,0.981531933753119,1.50051156317903,1.08506009479894,2.07970861530807,1.24900292158013,1.10391690523754,2.10854546986884,2.40756879782175,2.27407504055985,3.10419213877515,1.32845119707087,1.29058417979192,1.30325421702124,0,1.02943027143257,0,0,0,1.21251028578504,4.99306318531491,0.907170879989041,1.73675465473144,1.68808170616869,3.08726103876381,3.84417447767103,2.04682899626681,3.05622450172854,2.96836132889982,1.07946785661859,1.06537035187876,3.03870477251094,1.55776328755086,2.20799719073923,3.14234568938218,1.60405176242628,1.93370076765382,1.26295892981067,1.63882051206045,1.83574180943194,1.35359883872224,1.15523005656622,1.56869953835371,1.46139224653261,1.68882606228601,0,0.170093705276516,1.0795795805107,1.54227252690289,0.541892875087706,0.501689773854853,2.29388645740534,0,0.671624264166535,0,0,1.53870075069834,0.328014645699706,0.650756789328606,1.44257416306811,0.640986253728404,0.577566499444116,1.72279661398852,0.650060246036521,0,1.7400729292582,2.00263202249038,1.5350367472613,2.34322173223702,0.751941714077915,1.59518363305651,1.78975917573812,1.06838442776085,1.15699440752685,0.960950336825531,1.02090169995667,1.6185244936888,2.32422774648643,1.5740617341532,2.0911118104818,0.616067160352178,0,0,1.11194531462352,2.14687330112987,0.744316738719335,1.2655176988749,1.33441135746677,0.511795582622668,0,1.59101623962968,0,1.2591072030832,1.09814811894422,1.53156123049392,1.81964233415984,1.58510321173008,1.68503382495592,0,1.46228093778771,1.05650146756755,1.77449884830381,1.97967604735198,1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| ||
|short_description=p7@YAP1 | |short_description=p7@YAP1 | ||
}} | }} |
Latest revision as of 16:24, 24 September 2015
Short description: | p7@YAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_YAP1_5end |
Coexpression cluster: | C2089_pharyngeal_epidermoid_Hep2_rectal_Prostate_gastric_Adipocyte |
Association with transcript: | 117bp_to_ENST00000345877, ENST00000445250, ENST00000537274, uc001pgs.2, uc001pgt.2, uc001pgu.2, uc001pgv.2_5end |
EntrezGene: | YAP1 |
HGNC: | 16262 |
UniProt: | P46937F5GWC5F5H202 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.54e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.20e-09 | 160 |
endoderm | 1.20e-09 | 160 |
presumptive endoderm | 1.20e-09 | 160 |
digestive system | 1.64e-09 | 145 |
digestive tract | 1.64e-09 | 145 |
primitive gut | 1.64e-09 | 145 |
organ component layer | 9.98e-09 | 66 |
larynx | 1.91e-08 | 9 |
surface structure | 7.02e-08 | 99 |
subdivision of digestive tract | 6.26e-07 | 118 |