FFCP PHASE1:Hg19::chr3:129279342..129279414,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:129279342..129279414,- to FFCP PHASE1:Hg19::chr3:129279342..129279414,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23129 | |EntrezGene=23129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9107 | |HGNC=9107 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-85bp_to_ENST00000512807_5end | |||
|cluster_id=chr3:129279342..129279414,- | |||
|description=CAGE_peak_3_at_PLXND1_5end | |||
|id=chr3:129279342..129279414,- | |||
|ontology_enrichment_celltype=CL:0000055!9.12e-22!180;CL:0000057!4.70e-20!75;CL:0002620!5.04e-14!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.60e-23;23!CL:0000057;1.26e-11;73!CL:0002556;4.16e-10;6!CL:0002551;9.87e-10;6!CL:0002559;1.43e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.94e-23,23;CL:0000057,2.07e-22,76;CL:0002556,4.75e-10,6;CL:0002551,1.01e-09,6;CL:0002559,1.52e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.53e-07;5!DOID:450;1.53e-07;5!DOID:66;1.53e-07;5!DOID:423;1.53e-07;5!DOID:0080000;1.53e-07;5!DOID:11722;1.53e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.52e-07,5;DOID:450,1.52e-07,5;DOID:66,1.52e-07,5;DOID:423,1.52e-07,5;DOID:0080000,1.52e-07,5;DOID:11722,1.52e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.67e-12!95;UBERON:0002199!8.93e-12!45;UBERON:0002416!8.93e-12!45;UBERON:0002097!1.04e-11!40;UBERON:0000914!8.39e-11!83;UBERON:0002329!8.39e-11!83;UBERON:0003077!8.39e-11!83;UBERON:0003059!8.39e-11!83;UBERON:0007282!8.39e-11!83;UBERON:0009618!8.39e-11!83;UBERON:0007285!8.39e-11!83;UBERON:0005256!1.53e-10!143;UBERON:0002067!7.46e-09!9;UBERON:0004016!7.46e-09!9;UBERON:0010083!7.46e-09!9;UBERON:0000475!1.66e-08!365;UBERON:0004290!9.53e-08!70;UBERON:0002100!2.54e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.19e-14;9!UBERON:0002097;6.84e-14;41!UBERON:0003102;7.57e-13;50!UBERON:0000075;1.29e-11;16!UBERON:0002199;1.57e-11;46!UBERON:0002416;1.57e-11;46!UBERON:0001758;4.16e-10;6!UBERON:0003672;4.16e-10;6!UBERON:0002073;1.43e-09;5!UBERON:0001434;3.35e-09;36!UBERON:0003129;1.62e-08;7!UBERON:0004765;3.74e-07;26!UBERON:0011137;7.71e-07;11!UBERON:0010323;7.71e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.78e-18,41;UBERON:0003102,1.85e-18,99;UBERON:0002199,2.21e-18,46;UBERON:0002416,2.21e-18,46;UBERON:0002067,1.19e-14,9;UBERON:0004016,1.19e-14,9;UBERON:0010083,1.19e-14,9;UBERON:0000075,1.04e-11,16;UBERON:0001758,4.75e-10,6;UBERON:0003672,4.75e-10,6;UBERON:0011137,1.44e-09,14;UBERON:0002073,1.52e-09,5;UBERON:0005086,1.52e-09,5;UBERON:0003104,1.75e-08,160;UBERON:0009142,1.75e-08,160;UBERON:0003129,1.81e-08,7;UBERON:0007524,2.17e-07,73;UBERON:0002329,5.99e-07,71;UBERON:0003059,5.99e-07,71;UBERON:0007282,5.99e-07,71;UBERON:0004290,5.99e-07,71;UBERON:0009618,5.99e-07,71;UBERON:0011135,7.07e-07,5;UBERON:0002216,7.07e-07,5;UBERON:0011134,7.07e-07,5;UBERON:0002209,7.07e-07,5;UBERON:0002213,7.07e-07,5;UBERON:0005856,7.07e-07,5;UBERON:0005866,7.07e-07,5;UBERON:0005863,7.07e-07,5;UBERON:0007844,7.07e-07,5;UBERON:0011138,7.07e-07,5;UBERON:0001130,7.07e-07,5;UBERON:0001066,7.07e-07,5;UBERON:0001468,7.07e-07,5;UBERON:0002384,7.19e-07,371;UBERON:0010323,8.18e-07,11;UBERON:0003077,9.04e-07,72;UBERON:0007285,9.04e-07,72 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.704772020479856,0,0.446961094427288,0,0,1.26343974685366,1.56711376919903,0.737201809504527,0,0,0,3.46545788288131,1.98838425436749,0,0,0,0,0.369363174230364,0.612002073732759,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,1.34140171940727,0,0.361439152384566,0.50133791063589,0.869079113764942,0.795285947051099,0,0.189069634328136,0.443458794925128,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.264818361626438,1.14734648299525,0,0.560677600142307,1.06748995729705,0.74000264525148,0.622422070799533,0.808264032418128,0,0.605429710579726,0,12.653357319025,6.24320153660641,14.2617955386112,2.83952493048422,4.11020745253177,4.37056949793955,4.3539750077697,37.7685216821553,23.0928516546124,29.3445218539174,0,1.23633464639278,4.55080680969013,1.43723628363248,24.7454087512477,13.1374445865562,26.5981550864816,4.82875382968922,4.59731693698529,1.05166641234618,0.113432183160021,2.87023417102179,3.84403299873421,2.11931901159562,3.00091096084402,3.40073346486848,4.89517026086695,7.44467425326359,0.337552664482532,3.02054715999716,3.28163906517349,3.12969655383818,5.65761198865842,3.19508633264953,5.84362169720314,8.30846902321389,0,0,0,0,0,0,0.518305275076852,0,0.36497735907583,15.6449532329816,23.1566737749439,33.1523811245953,6.03678306441573,9.38443326170461,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0,0.514703430895577,0.329250856225877,0,0,0,21.1775398451711,85.2746523929254,0,0.463721619900307,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.1466765716419,0.258543431515556,3.57656445851882,0,1.86156681609409,3.12022310734098,7.45901385360212,4.25547396069835,4.26275486425759,1.14382394926518,54.2621605391443,13.1718453884923,0.65147236858747,2.84313558994037,0,0.301439377059586,0,0,0,0,0,1.67737398844108,4.59447743336456,0,1.73737568001095,6.78071864416265,2.14873155887875,0,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0,1.10422342547226,1.50051156317903,1.89885516589815,15.1818728917489,16.593895958136,10.5660618072736,9.83987885938791,0,0,1.03473071292505,0,0.368738337083406,6.0818530127658,11.7480694477644,2.05886054286514,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.464841513839837,0,0,0,2.41110341145674,0.364182336013434,1.31124414959424,0.451199612907412,0,2.35304930753057,1.46139224653261,0.105551628892876,0,0.170093705276516,0,0,0.541892875087706,1.50506932156456,0,0,4.02974558499921,0,0,0.512900250232778,0,0,0.206082023295445,7.23398772064913,6.1882124940441,0,0,1.6068392984416,0.290012154876366,0.616194468458578,0,0.689182862422653,0.214840489736547,0.145016693914229,0.170453254832202,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0.74129687641568,0.715624433709956,0.372158369359667,0,1.71567174531442,3.83846686967001,0.42793898803392,0,0,3.05783177891635,3.29444435683266,3.53437207037059,0,0,0,6.82687234725426,0,0,2.45699840534374,0.848432591722276,0,0,0,0,0.578775534266688,1.9676842561399,0,0,0.281695602532241,1.29070216983646,1.3754865741837,0.35667105148125,0.354761064070598,0,0,42.1215222879944,46.5413177925827,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0.557409525377156,0.721346064882224,0,0,0,0,0,0,0,20.5411211129873,0.626719583092093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.409074730008619,0,0.311039587661807,0,0,0,0.197286811273867,0,2.22273980289274,0,0,0,0,0.0874599999961957,1.44999915086959,0,0,0.236387681767936,0,0.291604613383254,0.694499979733169,0,0,0,0,0,0,0,0,1.76985594558733,0.227884111694002,0,0.179515288819544,1.4124158349861,0,0.915975934018623,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.52418000472609,0,0.19351266257817,0,0.0821154570532092,0.193978032976839,0,0,0,0.19871461170299,0,0.195551382734803,0.561111741760736,0,1.19885765749278,0,0,0,0,0,0,41.8584954706731,45.9206495311143,6.42588771108827,2.02265412931063,0,0,0,10.7441360354989,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00407637239968,22.6924529936302,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.316801009558219,0,0,0,0,0,2.17199840701485,4.32110745600634,5.22539776175055,1.19730191562487,0,0.681552087141687,1.69968137280189,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0.149254802886874,0,0,0,0,0.889811221596536,0,0,0,0,0.159296767163702,0,0,0,0,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| ||
|short_description=p3@PLXND1 | |||
}} | }} |
Latest revision as of 17:45, 24 September 2015
Short description: | p3@PLXND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLXND1_5end |
Coexpression cluster: | NA |
Association with transcript: | -85bp_to_ENST00000512807_5end |
EntrezGene: | PLXND1 |
HGNC: | 9107 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.94e-23 | 23 |
fibroblast | 2.07e-22 | 76 |
fibroblast of periodontium | 4.75e-10 | 6 |
fibroblast of dermis | 1.01e-09 | 6 |
hair follicle cell | 1.52e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.52e-07 | 5 |
myotonic disease | 1.52e-07 | 5 |
muscle tissue disease | 1.52e-07 | 5 |
myopathy | 1.52e-07 | 5 |
muscular disease | 1.52e-07 | 5 |
myotonic dystrophy | 1.52e-07 | 5 |