FFCP PHASE1:Hg19::chr22:39715463..39715466,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:39715463..39715466,-
|short_description=p14@RPL3
|description=CAGE_peak_14_at_RPL3_5end
|association_with_transcript=115bp_to_ENST00000498462_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6122 | |EntrezGene=6122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10332 | |HGNC=10332 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=115bp_to_ENST00000498462_5end | |||
|cluster_id=chr22:39715463..39715466,- | |||
|description=CAGE_peak_14_at_RPL3_5end | |||
|id=chr22:39715463..39715466,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.18e-34;1!CL:0000911;2.18e-34;1!CL:0000814;2.18e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.84e-34,1;CL:0000914,1.84e-34,1;CL:0000911,1.84e-34,1;CL:0000814,1.84e-34,1;CL:0002042,1.84e-34,1;CL:0002039,1.84e-34,1;CL:0002040,1.84e-34,1;CL:0002041,1.84e-34,1;CL:0000893,5.48e-18,2;CL:0002489,5.48e-18,2;CL:0000809,5.48e-18,2;CL:0000808,5.48e-18,2;CL:0000894,5.48e-18,2;CL:0000806,5.48e-18,2;CL:0000807,5.48e-18,2;CL:0000805,5.48e-18,2;CL:0002425,5.48e-18,2 | |||
|ontology_enrichment_development_v019=CL:0002425;5.96e-18;2!UBERON:0007123;6.78e-08;5 | |||
|ontology_enrichment_disease=DOID:162!5.13e-21!235;DOID:14566!4.97e-20!239;DOID:0050686!5.65e-15!137;DOID:305!1.10e-13!106;DOID:0050687!1.02e-12!143;DOID:2531!1.87e-09!51;DOID:0060083!1.87e-09!51;DOID:0060058!1.81e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;5.97e-34;1!DOID:74;9.86e-18;2!DOID:1287;1.50e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,5.05e-34,1;DOID:74,9.07e-18,2;DOID:1287,1.44e-09,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009722,4.25e-13,11;UBERON:0007690,4.25e-13,11;UBERON:0002370,1.12e-09,4;UBERON:0005058,1.12e-09,4;UBERON:0009113,1.12e-09,4;UBERON:0003295,1.12e-09,4;UBERON:0005562,1.12e-09,4;UBERON:0008814,2.17e-08,18;UBERON:0002046,6.13e-08,5;UBERON:0004117,6.13e-08,5;UBERON:0007689,6.13e-08,5;UBERON:0007123,6.13e-08,5;UBERON:0003091,6.13e-08,5;UBERON:0003351,7.17e-07,6 | |||
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| ||
|short_description=p14@RPL3 | |||
}} | }} |
Latest revision as of 18:22, 24 September 2015
Short description: | p14@RPL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RPL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 115bp_to_ENST00000498462_5end |
EntrezGene: | RPL3 |
HGNC: | 10332 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.84e-34 | 1 |
immature NK T cell | 1.84e-34 | 1 |
effector T cell | 1.84e-34 | 1 |
mature NK T cell | 1.84e-34 | 1 |
immature NK T cell stage IV | 1.84e-34 | 1 |
immature NK T cell stage I | 1.84e-34 | 1 |
immature NK T cell stage II | 1.84e-34 | 1 |
immature NK T cell stage III | 1.84e-34 | 1 |
thymocyte | 5.48e-18 | 2 |
double negative thymocyte | 5.48e-18 | 2 |
double-positive, alpha-beta thymocyte | 5.48e-18 | 2 |
DN4 thymocyte | 5.48e-18 | 2 |
DN1 thymic pro-T cell | 5.48e-18 | 2 |
DN2 thymocyte | 5.48e-18 | 2 |
DN3 thymocyte | 5.48e-18 | 2 |
immature single positive thymocyte | 5.48e-18 | 2 |
early T lineage precursor | 5.48e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
entire pharyngeal arch endoderm | 4.25e-13 | 11 |
early pharyngeal endoderm | 4.25e-13 | 11 |
thymus | 1.12e-09 | 4 |
hemolymphoid system gland | 1.12e-09 | 4 |
thymic region | 1.12e-09 | 4 |
pharyngeal gland | 1.12e-09 | 4 |
thymus primordium | 1.12e-09 | 4 |
pharyngeal arch system | 2.17e-08 | 18 |
thyroid gland | 6.13e-08 | 5 |
pharyngeal pouch | 6.13e-08 | 5 |
thyroid diverticulum | 6.13e-08 | 5 |
pharyngeal pouch 2 | 6.13e-08 | 5 |
thyroid primordium | 6.13e-08 | 5 |
pharyngeal epithelium | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
anemia | 5.05e-34 | 1 |
hematopoietic system disease | 9.07e-18 | 2 |
cardiovascular system disease | 1.44e-09 | 4 |