FFCP PHASE1:Hg19::chr16:1524969..1525015,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1186 | |EntrezGene=1186 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2025 | |HGNC=2025 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDB9,B3KVJ8,B3KXZ3,P51798,Q9BRN4 | |UniProt=E9PDB9,B3KVJ8,B3KXZ3,P51798,Q9BRN4 | ||
|association_with_transcript=69bp_to_ENST00000448525,NM_001114331,NM_001287,uc002clv.2,uc002clw.2_5end | |association_with_transcript=69bp_to_ENST00000448525,NM_001114331,NM_001287,uc002clv.2,uc002clw.2_5end | ||
|cluster_id=chr16:1524969..1525015,- | |||
|coexpression_cluster_id=C806 | |||
|description=CAGE_peak_2_at_CLCN7_5end | |description=CAGE_peak_2_at_CLCN7_5end | ||
|id=chr16:1524969..1525015,- | |id=chr16:1524969..1525015,- | ||
|ontology_enrichment_celltype=CL:0000766!4.02e-31!76;CL:0002194!1.42e-29!63;CL:0000576!1.42e-29!63;CL:0000040!1.42e-29!63;CL:0000559!1.42e-29!63;CL:0000557!1.50e-29!71;CL:0000839!1.79e-29!70;CL:0002009!3.91e-28!65;CL:0000763!4.65e-28!112;CL:0000049!4.65e-28!112;CL:0002057!1.02e-25!42;CL:0000860!1.41e-24!45;CL:0000988!1.69e-13!182;CL:0000037!6.16e-13!172;CL:0000566!6.16e-13!172;CL:0002032!8.95e-12!165;CL:0000837!8.95e-12!165;CL:0000738!5.38e-11!140;CL:0002087!2.43e-09!119;CL:0002031!3.21e-09!124 | |ontology_enrichment_celltype=CL:0000766!4.02e-31!76;CL:0002194!1.42e-29!63;CL:0000576!1.42e-29!63;CL:0000040!1.42e-29!63;CL:0000559!1.42e-29!63;CL:0000557!1.50e-29!71;CL:0000839!1.79e-29!70;CL:0002009!3.91e-28!65;CL:0000763!4.65e-28!112;CL:0000049!4.65e-28!112;CL:0002057!1.02e-25!42;CL:0000860!1.41e-24!45;CL:0000988!1.69e-13!182;CL:0000037!6.16e-13!172;CL:0000566!6.16e-13!172;CL:0002032!8.95e-12!165;CL:0000837!8.95e-12!165;CL:0000738!5.38e-11!140;CL:0002087!2.43e-09!119;CL:0002031!3.21e-09!124 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.21e-19;39!CL:0000234;1.21e-19;39!CL:0000860;1.57e-19;33!CL:0002057;1.57e-19;33!CL:0000576;2.60e-17;48!CL:0000766;2.01e-14;69!CL:0000763;1.13e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.20e-32,72;CL:0002194,4.34e-31,59;CL:0000576,4.34e-31,59;CL:0000040,4.34e-31,59;CL:0000559,4.34e-31,59;CL:0000557,8.54e-31,67;CL:0000839,9.78e-31,66;CL:0000473,1.41e-29,48;CL:0000234,1.41e-29,48;CL:0002009,1.63e-29,61;CL:0000763,1.11e-28,108;CL:0000049,1.11e-28,108;CL:0000860,1.01e-25,42;CL:0002057,1.01e-25,42;CL:0000988,1.66e-13,177;CL:0000037,6.15e-13,168;CL:0002032,9.00e-12,161;CL:0000837,9.00e-12,161;CL:0000738,4.82e-11,136;CL:0002087,2.12e-09,115;CL:0002031,3.04e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.73e-19;42!CL:0000049;9.49e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.66e-25!80;UBERON:0001474!4.18e-24!86;UBERON:0002405!5.97e-23!115;UBERON:0002193!1.52e-22!112;UBERON:0002390!5.21e-22!102;UBERON:0003061!5.21e-22!102;UBERON:0004765!2.72e-17!101;UBERON:0001434!2.72e-17!101;UBERON:0003081!8.03e-11!216;UBERON:0002204!1.86e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!1.66e-25!80;UBERON:0001474!4.18e-24!86;UBERON:0002405!5.97e-23!115;UBERON:0002193!1.52e-22!112;UBERON:0002390!5.21e-22!102;UBERON:0003061!5.21e-22!102;UBERON:0004765!2.72e-17!101;UBERON:0001434!2.72e-17!101;UBERON:0003081!8.03e-11!216;UBERON:0002204!1.86e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.90e-26,76;UBERON:0002405,1.15e-25,93;UBERON:0001474,7.17e-25,82;UBERON:0002193,4.23e-23,108;UBERON:0002390,1.28e-22,98;UBERON:0003061,1.28e-22,98;UBERON:0004765,3.47e-21,90;UBERON:0001434,4.65e-17,100;UBERON:0003081,1.45e-10,203;UBERON:0002204,2.76e-07,167 | |||
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| ||
|short_description=p2@CLCN7 | |short_description=p2@CLCN7 | ||
}} | }} |
Latest revision as of 18:22, 24 September 2015
Short description: | p2@CLCN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLCN7_5end |
Coexpression cluster: | C806_Melanocyte_CD14_Monocytederived_Macrophage_granulocyte_Mast_Eosinophils |
Association with transcript: | 69bp_to_ENST00000448525, NM_001114331, NM_001287, uc002clv.2, uc002clw.2_5end |
EntrezGene: | CLCN7 |
HGNC: | 2025 |
UniProt: | E9PDB9B3KVJ8B3KXZ3P51798Q9BRN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.20e-32 | 72 |
monopoietic cell | 4.34e-31 | 59 |
monocyte | 4.34e-31 | 59 |
monoblast | 4.34e-31 | 59 |
promonocyte | 4.34e-31 | 59 |
granulocyte monocyte progenitor cell | 8.54e-31 | 67 |
myeloid lineage restricted progenitor cell | 9.78e-31 | 66 |
defensive cell | 1.41e-29 | 48 |
phagocyte | 1.41e-29 | 48 |
macrophage dendritic cell progenitor | 1.63e-29 | 61 |
myeloid cell | 1.11e-28 | 108 |
common myeloid progenitor | 1.11e-28 | 108 |
classical monocyte | 1.01e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-25 | 42 |
hematopoietic cell | 1.66e-13 | 177 |
hematopoietic stem cell | 6.15e-13 | 168 |
hematopoietic oligopotent progenitor cell | 9.00e-12 | 161 |
hematopoietic multipotent progenitor cell | 9.00e-12 | 161 |
leukocyte | 4.82e-11 | 136 |
nongranular leukocyte | 2.12e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 3.04e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.90e-26 | 76 |
immune system | 1.15e-25 | 93 |
bone element | 7.17e-25 | 82 |
hemolymphoid system | 4.23e-23 | 108 |
hematopoietic system | 1.28e-22 | 98 |
blood island | 1.28e-22 | 98 |
skeletal element | 3.47e-21 | 90 |
skeletal system | 4.65e-17 | 100 |
lateral plate mesoderm | 1.45e-10 | 203 |
musculoskeletal system | 2.76e-07 | 167 |