FFCP PHASE1:Hg19::chr1:209605592..209605601,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:209605592..209605601,+
|short_description=p4@MIR205HG
|description=CAGE_peak_4_at_MIR205HG_5end
|association_with_transcript=22bp_to_AY320401_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=642587 | |EntrezGene=642587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=43562 | |HGNC=43562 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5Z9 | |UniProt=Q7Z5Z9 | ||
|association_with_transcript=22bp_to_AY320401_5end | |||
|cluster_id=chr1:209605592..209605601,+ | |||
|coexpression_cluster_id=C2406 | |||
|description=CAGE_peak_4_at_MIR205HG_5end | |||
|id=chr1:209605592..209605601,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.71e-35!43;CL:0000223!6.10e-27!59;CL:0002368!7.27e-24!13;CL:0000066!3.79e-17!254;CL:0002251!2.11e-16!21;CL:0002328!8.46e-13!3;CL:0002202!4.83e-11!9;CL:0002632!4.83e-11!9;CL:0000575!4.99e-09!2;CL:0000220!6.39e-08!246;CL:0002321!8.38e-08!248;CL:0002322!2.92e-07!5;CL:0000076!9.97e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002231;6.73e-11;3!CL:0000307;9.43e-11;3!CL:0002368;1.08e-09;13!CL:0000244;2.18e-08;4!CL:0000731;2.18e-08;4!CL:0000312;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,6.73e-11,3;CL:0000068,1.09e-10,3;CL:0000069,1.09e-10,3;CL:0000307,1.09e-10,3;CL:0000377,1.09e-10,3;CL:0002368,1.18e-09,13;CL:0000244,1.82e-08,4;CL:0000731,1.82e-08,4;CL:0000312,5.70e-07,5;CL:0002076,9.24e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000377;9.43e-11;3 | |||
|ontology_enrichment_disease=DOID:1749!5.95e-17!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.05e-29;1!DOID:3149;2.05e-29;1!DOID:3451;1.91e-15;2!DOID:4159;1.91e-15;2!DOID:0060122;1.91e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.20e-29,1;DOID:3149,4.20e-29,1;DOID:3451,2.74e-15,2;DOID:4159,2.74e-15,2;DOID:0060122,2.74e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.46e-13!72;UBERON:0004815!8.46e-13!3;UBERON:0002031!8.46e-13!3;UBERON:0003729!1.61e-12!5;UBERON:0006947!3.76e-12!3;UBERON:0004054!3.76e-12!3;UBERON:0000166!1.37e-10!21;UBERON:0002185!1.04e-09!4;UBERON:0000165!1.20e-09!28;UBERON:0000930!1.20e-09!28;UBERON:0005904!3.15e-09!4;UBERON:0003343!3.53e-09!4;UBERON:0004785!3.53e-09!4;UBERON:0004119!1.52e-08!169;UBERON:0000925!1.52e-08!169;UBERON:0006595!1.52e-08!169;UBERON:0000065!2.01e-08!53;UBERON:0001444!1.31e-07!48;UBERON:0000161!1.65e-07!35;UBERON:0007196!5.61e-07!14;UBERON:0001558!5.61e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;2.18e-08;4!UBERON:0000365;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.61e-08,4;UBERON:0000365,5.08e-07,5 | |||
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| ||
|short_description=p4@MIR205HG | |||
}} | }} |
Latest revision as of 19:01, 24 September 2015
Short description: | p4@MIR205HG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MIR205HG_5end |
Coexpression cluster: | C2406_Prostate_nasal_squamous_Urothelial_Small_Corneal_Keratinocyte |
Association with transcript: | 22bp_to_AY320401_5end |
EntrezGene: | MIR205HG |
HGNC: | 43562 |
UniProt: | Q7Z5Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 6.73e-11 | 3 |
duct epithelial cell | 1.09e-10 | 3 |
branched duct epithelial cell | 1.09e-10 | 3 |
tracheal epithelial cell | 1.09e-10 | 3 |
tracheoblast | 1.09e-10 | 3 |
respiratory epithelial cell | 1.18e-09 | 13 |
transitional epithelial cell | 1.82e-08 | 4 |
urothelial cell | 1.82e-08 | 4 |
keratinocyte | 5.70e-07 | 5 |
endo-epithelial cell | 9.24e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 2.61e-08 | 4 |
urothelium | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.20e-29 | 1 |
keratoacanthoma | 4.20e-29 | 1 |
skin carcinoma | 2.74e-15 | 2 |
skin cancer | 2.74e-15 | 2 |
integumentary system cancer | 2.74e-15 | 2 |