FFCP PHASE1:Hg19::chr3:132345940..132345968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84129 | |EntrezGene=84129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30211 | |HGNC=30211 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000487024,uc011blr.1_5end | |association_with_transcript=-22bp_to_ENST00000487024,uc011blr.1_5end | ||
|cluster_id=chr3:132345940..132345968,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_9_at_ACAD11_5end | |description=CAGE_peak_9_at_ACAD11_5end | ||
|id=chr3:132345940..132345968,- | |id=chr3:132345940..132345968,- | ||
|ontology_enrichment_celltype=CL:0002322!4.25e-12!5;CL:0000039!2.99e-11!7;CL:0000586!2.99e-11!7;CL:0002319!6.10e-08!25;CL:0000221!1.24e-07!71 | |ontology_enrichment_celltype=CL:0002322!4.25e-12!5;CL:0000039!2.99e-11!7;CL:0000586!2.99e-11!7;CL:0002319!6.10e-08!25;CL:0000221!1.24e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.67e-50;5!CL:0002321;1.20e-23;15!CL:0000039;1.50e-23;7!CL:0000586;1.50e-23;7!CL:0000222;4.44e-11;1!CL:0000148;9.84e-10;10!CL:0000147;4.34e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.07e-50,5;CL:0000039,1.42e-23,7;CL:0000586,1.42e-23,7;CL:0000148,1.04e-09,10;CL:0000541,1.04e-09,10;CL:0000147,4.53e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.07e-48;10!UBERON:0005564;3.07e-48;10 | |||
|ontology_enrichment_disease=DOID:3095!1.06e-09!22;DOID:2994!1.06e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.99e-16;22!DOID:2994;4.99e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.99e-16,22;DOID:2994,4.99e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.17e-10!8;UBERON:0000991!1.39e-08!21;UBERON:0009196!1.39e-08!21;UBERON:0009117!1.39e-08!21;UBERON:0005564!1.39e-08!21;UBERON:0004176!4.36e-08!22;UBERON:0003135!2.85e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.45e-45;8!UBERON:0003135;1.60e-32;11!UBERON:0000991;1.09e-22;21!UBERON:0003101;4.19e-16;22!UBERON:0000079;4.19e-16;22!UBERON:0000922;3.52e-12;49!UBERON:0002323;1.15e-07;45!UBERON:0003133;2.51e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.49e-45,8;UBERON:0003135,1.32e-32,11;UBERON:0000991,9.71e-23,21;UBERON:0009196,9.71e-23,21;UBERON:0009117,9.71e-23,21;UBERON:0005564,9.71e-23,21;UBERON:0004176,1.12e-21,22;UBERON:0003101,3.82e-16,22;UBERON:0000079,3.82e-16,22;UBERON:0002323,5.07e-10,46;UBERON:0003133,1.42e-09,48;UBERON:0004458,2.30e-09,49;UBERON:0003886,1.97e-08,54;UBERON:0005156,1.18e-07,59;UBERON:0000990,1.18e-07,59;UBERON:0002553,2.21e-07,61 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.803697554556718,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0,2.19552671033272,2.12047629314376,2.09149097165133,4.5610864206763,5.04641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0.144269212976445,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,0.988511511572023,0.522109747527277,0,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,1.92903778158023,0.962776056180637,0.83088067605837,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0.468334905806882,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,1.26184898228651,0,2.57329909649911,0,0,0,0,0,0,0,0,0.192914038270915,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.107824811396682,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7404083519818,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.299823467774787,0,3.52894871715692,0,0,0,0,0,0,0,0,0,0,0,1.38783067318587,0,1.26698501011437,10.4028606336821,13.6280876685436,26.2819412669656,1.50424523575425,1.66713136080127,2.14371304124943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@ACAD11 | |short_description=p9@ACAD11 | ||
}} | }} |
Latest revision as of 20:28, 24 September 2015
Short description: | p9@ACAD11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ACAD11_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -22bp_to_ENST00000487024, uc011blr.1_5end |
EntrezGene: | ACAD11 |
HGNC: | 30211 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.07e-50 | 5 |
germ line cell | 1.42e-23 | 7 |
germ cell | 1.42e-23 | 7 |
melanocyte | 1.04e-09 | 10 |
melanoblast | 1.04e-09 | 10 |
pigment cell | 4.53e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 6.49e-45 | 8 |
male reproductive organ | 1.32e-32 | 11 |
gonad | 9.71e-23 | 21 |
indifferent external genitalia | 9.71e-23 | 21 |
indifferent gonad | 9.71e-23 | 21 |
gonad primordium | 9.71e-23 | 21 |
external genitalia | 1.12e-21 | 22 |
male organism | 3.82e-16 | 22 |
male reproductive system | 3.82e-16 | 22 |
body cavity | 5.07e-10 | 46 |
reproductive organ | 1.42e-09 | 48 |
body cavity or lining | 2.30e-09 | 49 |
body cavity precursor | 1.97e-08 | 54 |
reproductive structure | 1.18e-07 | 59 |
reproductive system | 1.18e-07 | 59 |
anatomical cavity | 2.21e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.99e-16 | 22 |
germ cell cancer | 4.99e-16 | 22 |