FFCP PHASE1:Hg19::chr9:124088975..124088996,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2934 | |EntrezGene=2934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4620 | |HGNC=4620 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T0H7 | |UniProt=Q5T0H7 | ||
|association_with_transcript=-13bp_to_ENST00000373805_5end | |association_with_transcript=-13bp_to_ENST00000373805_5end | ||
|cluster_id=chr9:124088975..124088996,+ | |||
|description=CAGE_peak_13_at_GSN_5end | |description=CAGE_peak_13_at_GSN_5end | ||
|id=chr9:124088975..124088996,+ | |id=chr9:124088975..124088996,+ | ||
|ontology_enrichment_celltype=CL:0000136!4.97e-09!15;CL:0002334!1.16e-08!12;CL:0005020!2.69e-07!6;CL:0002138!2.69e-07!6;CL:0005022!2.69e-07!6;CL:0002139!7.55e-07!24 | |ontology_enrichment_celltype=CL:0000136!4.97e-09!15;CL:0002334!1.16e-08!12;CL:0005020!2.69e-07!6;CL:0002138!2.69e-07!6;CL:0005022!2.69e-07!6;CL:0002139!7.55e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002144;2.66e-12;3!CL:0000136;5.51e-07;13!CL:0002138;9.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,3.50e-12,3;CL:0000136,2.99e-08,15;CL:0005020,9.95e-07,6;CL:0002138,9.95e-07,6;CL:0005022,9.95e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.39e-20;29!CL:0005022;9.57e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.86e-21!115;UBERON:0000477!6.37e-14!286;UBERON:0001737!3.77e-12!9;UBERON:0004111!2.84e-10!241;UBERON:0000468!2.28e-09!659;UBERON:0000064!6.38e-09!219;UBERON:0001049!1.04e-08!57;UBERON:0005068!1.04e-08!57;UBERON:0006241!1.04e-08!57;UBERON:0007135!1.04e-08!57;UBERON:0000467!5.84e-08!625;UBERON:0000480!7.06e-08!626;UBERON:0000025!8.92e-08!194;UBERON:0003124!1.54e-07!7;UBERON:0005631!1.79e-07!14;UBERON:0000158!1.79e-07!14;UBERON:0001557!2.31e-07!19;UBERON:0004923!3.12e-07!57;UBERON:0004457!8.64e-07!12;UBERON:0000042!8.64e-07!12;UBERON:0002298!9.82e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.42e-36;9!UBERON:0001557;7.42e-36;9!UBERON:0010523;2.66e-12;3!UBERON:0001915;2.66e-12;3!UBERON:0001982;2.66e-12;3!UBERON:0000065;7.95e-11;44!UBERON:0000072;6.17e-10;37!UBERON:0005406;1.46e-08;2!UBERON:0003127;1.77e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.34e-36,9;UBERON:0001557,4.80e-16,19;UBERON:0008947,6.68e-15,38;UBERON:0003258,6.68e-15,38;UBERON:0010523,3.50e-12,3;UBERON:0001915,3.50e-12,3;UBERON:0001982,3.50e-12,3;UBERON:0000065,1.28e-09,54;UBERON:0001041,3.21e-09,87;UBERON:0003127,1.21e-08,2;UBERON:0005406,1.35e-08,2;UBERON:0000072,3.47e-08,47;UBERON:0001004,2.31e-07,74 | |||
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| ||
|short_description=p13@GSN | |short_description=p13@GSN | ||
}} | }} |
Latest revision as of 20:56, 24 September 2015
Short description: | p13@GSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GSN_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000373805_5end |
EntrezGene: | GSN |
HGNC: | 4620 |
UniProt: | Q5T0H7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 3.50e-12 | 3 |
fat cell | 2.99e-08 | 15 |
lymphangioblast | 9.95e-07 | 6 |
endothelial cell of lymphatic vessel | 9.95e-07 | 6 |
vascular lymphangioblast | 9.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.34e-36 | 9 |
upper respiratory tract | 4.80e-16 | 19 |
respiratory primordium | 6.68e-15 | 38 |
endoderm of foregut | 6.68e-15 | 38 |
microcirculatory vessel | 3.50e-12 | 3 |
endothelium of capillary | 3.50e-12 | 3 |
capillary | 3.50e-12 | 3 |
respiratory tract | 1.28e-09 | 54 |
foregut | 3.21e-09 | 87 |
open tracheal system trachea | 1.21e-08 | 2 |
perirenal fat | 1.35e-08 | 2 |
segment of respiratory tract | 3.47e-08 | 47 |
respiratory system | 2.31e-07 | 74 |