FFCP PHASE1:Hg19::chr2:220309507..220309512,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10290 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-254bp_to_ENST00000409595_5end | |||
|cluster_id=chr2:220309507..220309512,+ | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_33_at_SPEG_5end | |||
|id=chr2:220309507..220309512,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.02e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.84e-24;19!CL:0000213;7.44e-07;58!CL:0000215;7.44e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.73e-24,19;CL:0000213,1.35e-08,58;CL:0000215,1.35e-08,58;CL:0000076,5.58e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060084!7.24e-19!3;DOID:127!7.24e-19!3;DOID:0060072!2.77e-14!4 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.03e-17;3!DOID:127;1.03e-17;3!DOID:0060072;1.21e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.12e-17,3;DOID:127,1.12e-17,3;DOID:0060072,1.29e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.75e-27!41;UBERON:0001890!2.75e-27!41;UBERON:0006240!2.75e-27!41;UBERON:0003080!1.40e-26!42;UBERON:0001869!1.59e-26!32;UBERON:0002791!1.14e-25!33;UBERON:0002020!7.34e-25!34;UBERON:0003528!7.34e-25!34;UBERON:0001893!7.34e-25!34;UBERON:0000369!2.79e-24!4;UBERON:0002435!2.79e-24!4;UBERON:0000204!2.79e-24!4;UBERON:0010082!2.79e-24!4;UBERON:0009663!5.68e-21!7;UBERON:0007023!3.42e-19!115;UBERON:0001049!6.73e-19!57;UBERON:0005068!6.73e-19!57;UBERON:0006241!6.73e-19!57;UBERON:0007135!6.73e-19!57;UBERON:0005383!1.03e-18!3;UBERON:0005382!1.03e-18!3;UBERON:0002616!3.65e-18!59;UBERON:0003056!1.77e-17!61;UBERON:0003075!2.70e-17!86;UBERON:0007284!2.70e-17!86;UBERON:0002346!2.29e-16!90;UBERON:0002308!2.85e-16!9;UBERON:0002420!2.85e-16!9;UBERON:0000125!2.85e-16!9;UBERON:0007245!2.85e-16!9;UBERON:0010009!2.85e-16!9;UBERON:0010011!2.85e-16!9;UBERON:0000454!2.85e-16!9;UBERON:0001950!7.05e-16!20;UBERON:0000955!7.19e-15!69;UBERON:0006238!7.19e-15!69;UBERON:0002619!2.13e-14!22;UBERON:0001017!7.09e-14!82;UBERON:0001873!3.70e-13!2;UBERON:0010122!3.70e-13!2;UBERON:0005743!4.28e-13!86;UBERON:0000956!1.32e-12!25;UBERON:0000203!1.32e-12!25;UBERON:0000073!1.42e-11!94;UBERON:0001016!1.42e-11!94;UBERON:0000200!8.09e-09!6;UBERON:0002771!2.55e-08!3;UBERON:0000033!2.78e-08!123;UBERON:0000153!9.32e-08!129;UBERON:0007811!9.32e-08!129;UBERON:0002022!2.52e-07!1;UBERON:0001882!2.67e-07!1;UBERON:0005403!2.67e-07!1;UBERON:0001874!2.84e-07!1;UBERON:0002146!4.06e-07!1;UBERON:0005623!4.06e-07!1;UBERON:0002902!4.31e-07!1;UBERON:0009899!4.31e-07!1;UBERON:0004121!6.44e-07!169;UBERON:0003112!6.49e-07!1;UBERON:0000032!6.49e-07!1;UBERON:0005253!6.49e-07!1;UBERON:0003128!6.49e-07!1;UBERON:0002241!6.49e-07!1;UBERON:0001703!6.49e-07!1;UBERON:0004761!6.49e-07!1;UBERON:0009617!6.49e-07!1;UBERON:0002581!9.18e-07!1;UBERON:0001871!9.39e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,2.61460037580088,1.99945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.723578631752448,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0,0,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p33@SPEG | |||
}} |
Latest revision as of 21:18, 24 September 2015
Short description: | p33@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_SPEG_5end |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | -254bp_to_ENST00000409595_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.73e-24 | 19 |
lining cell | 1.35e-08 | 58 |
barrier cell | 1.35e-08 | 58 |
squamous epithelial cell | 5.58e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.12e-17 | 3 |
leiomyoma | 1.12e-17 | 3 |
benign neoplasm | 1.29e-13 | 4 |