FFCP PHASE1:Hg19::chr14:61943862..61943869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5583 | |EntrezGene=5583 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |HGNC=9403 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000536400,uc010tsb.1_5end | |association_with_transcript=-15bp_to_ENST00000536400,uc010tsb.1_5end | ||
|cluster_id=chr14:61943862..61943869,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_10_at_PRKCH_5end | |description=CAGE_peak_10_at_PRKCH_5end | ||
Latest revision as of 22:04, 24 September 2015
| Short description: | p10@PRKCH |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_10_at_PRKCH_5end |
| Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
| Association with transcript: | -15bp_to_ENST00000536400, uc010tsb.1_5end |
| EntrezGene: | PRKCH |
| HGNC: | 9403 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p10@PRKCH |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukocyte | 4.40e-59 | 72 |
| classical monocyte | 3.28e-57 | 42 |
| CD14-positive, CD16-negative classical monocyte | 3.28e-57 | 42 |
| leukocyte | 5.18e-54 | 136 |
| defensive cell | 3.12e-49 | 48 |
| phagocyte | 3.12e-49 | 48 |
| hematopoietic stem cell | 6.25e-42 | 168 |
| monopoietic cell | 3.54e-41 | 59 |
| monocyte | 3.54e-41 | 59 |
| monoblast | 3.54e-41 | 59 |
Showing 1 to 10 of 35 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.28e-30 | 98 |
| blood island | 1.28e-30 | 98 |
| bone marrow | 1.37e-30 | 76 |
| bone element | 6.85e-28 | 82 |
| hemolymphoid system | 4.09e-27 | 108 |
| immune system | 8.12e-26 | 93 |
| skeletal element | 7.54e-25 | 90 |
| skeletal system | 9.97e-22 | 100 |
| connective tissue | 1.29e-13 | 371 |
| lateral plate mesoderm | 4.73e-11 | 203 |
Showing 1 to 10 of 11 entries
