FFCP PHASE1:Hg19::chr20:29978369..29978380,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=245932 | |EntrezGene=245932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18099 | |HGNC=18099 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000492344_5end | |||
|cluster_id=chr20:29978369..29978380,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_DEFB119_5end | |||
|id=chr20:29978369..29978380,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.91e-15;2!UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10!UBERON:0003056;1.20e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.08e-29!2;UBERON:0002757!1.08e-29!2;UBERON:0010134!1.08e-29!2;UBERON:0002784!1.08e-29!2;UBERON:0005408!1.08e-29!2;UBERON:0001899!1.08e-29!2;UBERON:0001301!8.63e-16!1;UBERON:0002146!1.54e-15!1;UBERON:0005623!1.54e-15!1;UBERON:0003296!2.22e-15!4;UBERON:0010133!2.22e-15!4;UBERON:0002336!3.66e-15!1;UBERON:0001018!3.66e-15!1;UBERON:0002473!3.66e-15!1;UBERON:0005340!3.66e-15!1;UBERON:0002316!3.66e-15!1;UBERON:0003544!3.66e-15!1;UBERON:0001020!3.66e-15!1;UBERON:0005970!3.66e-15!1;UBERON:0002437!3.66e-15!1;UBERON:0003135!1.62e-12!11;UBERON:0003101!9.53e-11!22;UBERON:0000079!9.53e-11!22;UBERON:0001894!3.44e-09!7;UBERON:0006222!3.44e-09!7;UBERON:0007023!3.66e-09!115;UBERON:0000473!3.04e-08!8;UBERON:0005162!3.08e-08!2;UBERON:0000122!3.08e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.36e-57;2!UBERON:0002757;6.36e-57;2!UBERON:0010134;6.36e-57;2!UBERON:0005408;6.36e-57;2!UBERON:0001899;6.36e-57;2!UBERON:0001301;2.05e-29;1!UBERON:0003296;4.21e-29;4!UBERON:0010133;4.21e-29;4!UBERON:0002784;4.21e-29;4!UBERON:0003135;5.88e-24;11!UBERON:0001894;4.02e-17;7!UBERON:0000473;2.65e-15;8!UBERON:0003101;2.22e-12;22!UBERON:0000079;2.22e-12;22!UBERON:0006947;9.43e-11;3!UBERON:0004054;9.43e-11;3!UBERON:0005904;2.18e-08;4!UBERON:0000966;6.77e-07;5!UBERON:0005388;6.77e-07;5!UBERON:0001802;6.77e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.36e-57,2;UBERON:0002757,6.36e-57,2;UBERON:0010134,6.36e-57,2;UBERON:0005408,6.36e-57,2;UBERON:0001899,6.36e-57,2;UBERON:0001301,1.78e-29,1;UBERON:0003296,4.21e-29,4;UBERON:0010133,4.21e-29,4;UBERON:0002784,4.21e-29,4;UBERON:0003135,5.65e-24,11;UBERON:0001894,4.02e-17,7;UBERON:0006222,4.02e-17,7;UBERON:0000473,2.65e-15,8;UBERON:0003101,2.17e-12,22;UBERON:0000079,2.17e-12,22;UBERON:0006947,8.99e-11,3;UBERON:0004054,8.99e-11,3;UBERON:0007023,3.55e-09,114;UBERON:0005904,2.11e-08,4 | |||
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|short_description=p3@DEFB119 | |||
}} | }} |
Latest revision as of 00:19, 25 September 2015
Short description: | p3@DEFB119 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DEFB119_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000492344_5end |
EntrezGene: | DEFB119 |
HGNC: | 18099 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 6.36e-57 | 2 |
regional part of epithalamus | 6.36e-57 | 2 |
secretory circumventricular organ | 6.36e-57 | 2 |
circumventricular organ | 6.36e-57 | 2 |
epithalamus | 6.36e-57 | 2 |
epididymis | 1.78e-29 | 1 |
gland of diencephalon | 4.21e-29 | 4 |
neuroendocrine gland | 4.21e-29 | 4 |
regional part of diencephalon | 4.21e-29 | 4 |
male reproductive organ | 5.65e-24 | 11 |
diencephalon | 4.02e-17 | 7 |
future diencephalon | 4.02e-17 | 7 |
testis | 2.65e-15 | 8 |
male organism | 2.17e-12 | 22 |
male reproductive system | 2.17e-12 | 22 |
male genital duct | 8.99e-11 | 3 |
internal male genitalia | 8.99e-11 | 3 |
adult organism | 3.55e-09 | 114 |
duct of male reproductive system | 2.11e-08 | 4 |