FFCP PHASE1:Hg19::chr11:89224638..89224649,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50507 | |EntrezGene=50507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7891 | |HGNC=7891 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPH5,E7EMD7 | |UniProt=Q9NPH5,E7EMD7 | ||
|association_with_transcript=3bp_to_ENST00000263317,ENST00000535633,NM_001143836,NM_016931,NR_026571,uc001pct.2,uc001pcu.2,uc001pcv.2,uc001pcw.2,uc001pcx.2,uc001pcy.2,uc009yvo.2,uc009yvp.2,uc009yvs.1,uc010rtu.1_5end | |association_with_transcript=3bp_to_ENST00000263317,ENST00000535633,NM_001143836,NM_016931,NR_026571,uc001pct.2,uc001pcu.2,uc001pcv.2,uc001pcw.2,uc001pcx.2,uc001pcy.2,uc009yvo.2,uc009yvp.2,uc009yvs.1,uc010rtu.1_5end | ||
|cluster_id=chr11:89224638..89224649,- | |||
|coexpression_cluster_id=C1648 | |coexpression_cluster_id=C1648 | ||
|description=CAGE_peak_6_at_NOX4_5end | |description=CAGE_peak_6_at_NOX4_5end | ||
|id=chr11:89224638..89224649,- | |id=chr11:89224638..89224649,- | ||
|ontology_enrichment_celltype=CL:0002139!3.07e-18!24;CL:0000071!3.74e-14!18;CL:0002546!3.74e-14!18;CL:0000222!4.34e-13!119;CL:0000115!6.44e-13!35;CL:0000055!1.44e-10!180;CL:0002078!8.12e-10!44;CL:0002543!5.13e-09!6;CL:0000220!1.26e-08!246;CL:0002321!2.11e-08!248;CL:0000393!9.08e-08!60;CL:0000211!9.08e-08!60;CL:0000213!1.77e-07!57;CL:0000215!1.77e-07!57;CL:0000359!2.59e-07!32;CL:0000680!5.91e-07!57;CL:0000056!5.91e-07!57;CL:0000355!5.91e-07!57 | |ontology_enrichment_celltype=CL:0002139!3.07e-18!24;CL:0000071!3.74e-14!18;CL:0002546!3.74e-14!18;CL:0000222!4.34e-13!119;CL:0000115!6.44e-13!35;CL:0000055!1.44e-10!180;CL:0002078!8.12e-10!44;CL:0002543!5.13e-09!6;CL:0000220!1.26e-08!246;CL:0002321!2.11e-08!248;CL:0000393!9.08e-08!60;CL:0000211!9.08e-08!60;CL:0000213!1.77e-07!57;CL:0000215!1.77e-07!57;CL:0000359!2.59e-07!32;CL:0000680!5.91e-07!57;CL:0000056!5.91e-07!57;CL:0000355!5.91e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.85e-24;24!CL:0000071;2.70e-22;18!CL:0002543;3.61e-22;6!CL:0000064;2.82e-17;3!CL:0000067;2.82e-17;3!CL:0005012;2.82e-17;3!CL:0002304;2.82e-17;3!CL:0000115;9.42e-12;36!CL:0002144;6.09e-08;3!CL:0002579;6.09e-08;3!CL:0002605;1.11e-07;3!CL:0002618;1.11e-07;3!CL:0000213;1.42e-07;58!CL:0000215;1.42e-07;58!CL:0002078;3.16e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.65e-24,24;CL:0002543,2.87e-22,6;CL:0000071,3.05e-22,18;CL:0002546,3.05e-22,18;CL:0000064,3.08e-17,3;CL:0000067,3.08e-17,3;CL:0005012,3.08e-17,3;CL:0002304,3.08e-17,3;CL:0000115,1.76e-15,36;CL:0002078,5.90e-12,45;CL:0000222,7.15e-10,121;CL:0000213,8.35e-09,58;CL:0000215,8.35e-09,58;CL:0002579,4.54e-08,3;CL:0002144,6.43e-08,3;CL:0002605,8.19e-08,3;CL:0002618,1.11e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.70e-22;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;8.89e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,9.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002049!3.36e-23!79;UBERON:0007798!3.36e-23!79;UBERON:0000055!1.52e-22!69;UBERON:0001981!2.30e-20!60;UBERON:0007500!2.30e-20!60;UBERON:0004537!2.30e-20!60;UBERON:0006965!2.30e-20!60;UBERON:0004872!7.79e-18!84;UBERON:0004535!4.56e-17!110;UBERON:0001009!4.67e-17!113;UBERON:0001986!3.74e-14!18;UBERON:0004638!3.74e-14!18;UBERON:0004852!3.74e-14!18;UBERON:0001637!3.27e-13!42;UBERON:0003509!3.27e-13!42;UBERON:0004572!3.27e-13!42;UBERON:0003914!1.44e-12!118;UBERON:0000487!1.15e-10!22;UBERON:0000025!7.16e-10!194;UBERON:0000119!1.52e-09!312;UBERON:0004573!8.07e-09!33;UBERON:0004571!8.07e-09!33;UBERON:0006914!8.21e-09!25;UBERON:0000483!1.23e-08!309;UBERON:0004111!4.81e-08!241;UBERON:0000490!6.37e-08!138;UBERON:0002385!9.70e-08!63;UBERON:0001015!9.70e-08!63;UBERON:0000383!9.70e-08!63;UBERON:0001134!1.50e-07!61;UBERON:0002036!1.50e-07!61;UBERON:0003082!1.50e-07!61;UBERON:0000947!1.81e-07!21;UBERON:0010191!1.81e-07!21;UBERON:0007625!2.94e-07!11;UBERON:0004290!7.32e-07!70 | |ontology_enrichment_uberon=UBERON:0002049!3.36e-23!79;UBERON:0007798!3.36e-23!79;UBERON:0000055!1.52e-22!69;UBERON:0001981!2.30e-20!60;UBERON:0007500!2.30e-20!60;UBERON:0004537!2.30e-20!60;UBERON:0006965!2.30e-20!60;UBERON:0004872!7.79e-18!84;UBERON:0004535!4.56e-17!110;UBERON:0001009!4.67e-17!113;UBERON:0001986!3.74e-14!18;UBERON:0004638!3.74e-14!18;UBERON:0004852!3.74e-14!18;UBERON:0001637!3.27e-13!42;UBERON:0003509!3.27e-13!42;UBERON:0004572!3.27e-13!42;UBERON:0003914!1.44e-12!118;UBERON:0000487!1.15e-10!22;UBERON:0000025!7.16e-10!194;UBERON:0000119!1.52e-09!312;UBERON:0004573!8.07e-09!33;UBERON:0004571!8.07e-09!33;UBERON:0006914!8.21e-09!25;UBERON:0000483!1.23e-08!309;UBERON:0004111!4.81e-08!241;UBERON:0000490!6.37e-08!138;UBERON:0002385!9.70e-08!63;UBERON:0001015!9.70e-08!63;UBERON:0000383!9.70e-08!63;UBERON:0001134!1.50e-07!61;UBERON:0002036!1.50e-07!61;UBERON:0003082!1.50e-07!61;UBERON:0000947!1.81e-07!21;UBERON:0010191!1.81e-07!21;UBERON:0007625!2.94e-07!11;UBERON:0004290!7.32e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.70e-22;18!UBERON:0001986;2.70e-22;18!UBERON:0004852;2.70e-22;18!UBERON:0000487;5.88e-18;22!UBERON:0001778;2.82e-17;3!UBERON:0001775;2.82e-17;3!UBERON:0006914;1.29e-15;25!UBERON:0001638;1.04e-14;9!UBERON:0003920;1.04e-14;9!UBERON:0004582;1.04e-14;9!UBERON:0000490;1.09e-14;33!UBERON:0000488;4.41e-13;4!UBERON:0002049;1.88e-12;75!UBERON:0007798;1.88e-12;75!UBERON:0007500;3.06e-12;56!UBERON:0001981;3.06e-12;56!UBERON:0004537;3.06e-12;56!UBERON:0007625;3.83e-12;11!UBERON:0000055;2.72e-11;65!UBERON:0001801;1.77e-09;14!UBERON:0002203;7.25e-09;6!UBERON:0001768;7.25e-09;6!UBERON:0002200;7.25e-09;6!UBERON:0003914;1.09e-08;74!UBERON:0003688;1.60e-08;6!UBERON:0002358;1.60e-08;6!UBERON:0003684;1.60e-08;6!UBERON:0001178;1.60e-08;6!UBERON:0010523;6.09e-08;3!UBERON:0001915;6.09e-08;3!UBERON:0001982;6.09e-08;3!UBERON:0000025;2.64e-07;93!UBERON:0000019;6.66e-07;19!UBERON:0000047;6.66e-07;19!UBERON:0004088;6.66e-07;19!UBERON:0010230;6.66e-07;19!UBERON:0001637;7.74e-07;42!UBERON:0003509;7.74e-07;42!UBERON:0004572;7.74e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,8.43e-25,78;UBERON:0007798,8.43e-25,78;UBERON:0004638,3.05e-22,18;UBERON:0001986,3.05e-22,18;UBERON:0004852,3.05e-22,18;UBERON:0000055,1.25e-20,68;UBERON:0007500,5.77e-19,59;UBERON:0001981,5.77e-19,59;UBERON:0004537,5.77e-19,59;UBERON:0006965,5.77e-19,59;UBERON:0000487,6.49e-18,22;UBERON:0001778,3.08e-17,3;UBERON:0001775,3.08e-17,3;UBERON:0004535,2.09e-16,109;UBERON:0001009,7.66e-16,112;UBERON:0006914,1.41e-15,25;UBERON:0001638,8.97e-15,9;UBERON:0003920,8.97e-15,9;UBERON:0004582,8.97e-15,9;UBERON:0000488,4.71e-13,4;UBERON:0004872,1.78e-12,83;UBERON:0007625,4.32e-12,11;UBERON:0003914,2.25e-10,117;UBERON:0000490,1.49e-09,148;UBERON:0001801,1.94e-09,14;UBERON:0002203,7.57e-09,6;UBERON:0001768,7.57e-09,6;UBERON:0002200,7.57e-09,6;UBERON:0003688,1.45e-08,6;UBERON:0002358,1.45e-08,6;UBERON:0003684,1.45e-08,6;UBERON:0001178,1.45e-08,6;UBERON:0001637,2.45e-08,42;UBERON:0003509,2.45e-08,42;UBERON:0004572,2.45e-08,42;UBERON:0010523,6.43e-08,3;UBERON:0001915,6.43e-08,3;UBERON:0001982,6.43e-08,3;UBERON:0000483,2.67e-07,306;UBERON:0000025,3.41e-07,192;UBERON:0000119,3.58e-07,309;UBERON:0004573,9.25e-07,33;UBERON:0004571,9.25e-07,33 | |||
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| ||
|short_description=p6@NOX4 | |short_description=p6@NOX4 | ||
}} | }} |
Latest revision as of 00:19, 25 September 2015
Short description: | p6@NOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NOX4_5end |
Coexpression cluster: | C1648_Adipocyte_Ciliary_Endothelial_Smooth_aorta_kidney_hepatic |
Association with transcript: | 3bp_to_ENST00000263317, ENST00000535633, NM_001143836, NM_016931, NR_026571, uc001pct.2, uc001pcu.2, uc001pcv.2, uc001pcw.2, uc001pcx.2, uc001pcy.2, uc009yvo.2, uc009yvp.2, uc009yvs.1, uc010rtu.1_5end |
EntrezGene: | NOX4 |
HGNC: | 7891 |
UniProt: | Q9NPH5E7EMD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.65e-24 | 24 |
vein endothelial cell | 2.87e-22 | 6 |
blood vessel endothelial cell | 3.05e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.05e-22 | 18 |
ciliated cell | 3.08e-17 | 3 |
ciliated epithelial cell | 3.08e-17 | 3 |
multi-ciliated epithelial cell | 3.08e-17 | 3 |
non-pigmented ciliary epithelial cell | 3.08e-17 | 3 |
endothelial cell | 1.76e-15 | 36 |
meso-epithelial cell | 5.90e-12 | 45 |
mesodermal cell | 7.15e-10 | 121 |
lining cell | 8.35e-09 | 58 |
barrier cell | 8.35e-09 | 58 |
omentum preadipocyte | 4.54e-08 | 3 |
capillary endothelial cell | 6.43e-08 | 3 |
astrocyte of the cerebral cortex | 8.19e-08 | 3 |
endothelial cell of umbilical vein | 1.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 9.67e-07 | 1 |