FFCP PHASE1:Hg19::chr8:105235707..105235716,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9699 | |EntrezGene=9699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17283 | |HGNC=17283 | ||
|TSSclassifier=strong | |||
|UniProt=E5RI36 | |UniProt=E5RI36 | ||
|association_with_transcript=115bp_to_ENST00000523362_5end | |association_with_transcript=115bp_to_ENST00000523362_5end | ||
|cluster_id=chr8:105235707..105235716,+ | |||
|coexpression_cluster_id=C136 | |||
|description=CAGE_peak_18_at_RIMS2_5end | |description=CAGE_peak_18_at_RIMS2_5end | ||
|id=chr8:105235707..105235716,+ | |id=chr8:105235707..105235716,+ | ||
|ontology_enrichment_celltype=CL:0002617!3.14e-15!2;CL:0000136!1.13e-11!15;CL:0002615!2.84e-10!3;CL:0002579!2.84e-10!3;CL:0002580!3.27e-10!3;CL:0002334!1.80e-09!12;CL:0002566!2.17e-08!1 | |ontology_enrichment_celltype=CL:0002617!3.14e-15!2;CL:0000136!1.13e-11!15;CL:0002615!2.84e-10!3;CL:0002579!2.84e-10!3;CL:0002580!3.27e-10!3;CL:0002334!1.80e-09!12;CL:0002566!2.17e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002521;2.59e-12;3!CL:0002615;2.59e-12;3!CL:0002579;3.24e-12;3!CL:0000136;3.75e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,2.31e-12,3;CL:0002615,2.89e-12,3;CL:0002579,3.24e-12,3;CL:0000136,8.46e-10,15 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.49e-14;10!UBERON:0007687;2.49e-14;10 | |||
|ontology_enrichment_disease=DOID:2355!2.33e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.44e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.44e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0003688!7.89e-19!6;UBERON:0002358!7.89e-19!6;UBERON:0003684!7.89e-19!6;UBERON:0001178!7.89e-19!6;UBERON:0000310!1.92e-11!10;UBERON:0001443!2.04e-10!11;UBERON:0004457!1.69e-09!12;UBERON:0000042!1.69e-09!12;UBERON:0007029!1.52e-08!1;UBERON:0002022!3.10e-08!1;UBERON:0002902!6.24e-08!1;UBERON:0009899!6.24e-08!1;UBERON:0001950!7.73e-08!20;UBERON:0002619!3.87e-07!22;UBERON:0009569!9.60e-07!113 | |ontology_enrichment_uberon=UBERON:0003688!7.89e-19!6;UBERON:0002358!7.89e-19!6;UBERON:0003684!7.89e-19!6;UBERON:0001178!7.89e-19!6;UBERON:0000310!1.92e-11!10;UBERON:0001443!2.04e-10!11;UBERON:0004457!1.69e-09!12;UBERON:0000042!1.69e-09!12;UBERON:0007029!1.52e-08!1;UBERON:0002022!3.10e-08!1;UBERON:0002902!6.24e-08!1;UBERON:0009899!6.24e-08!1;UBERON:0001950!7.73e-08!20;UBERON:0002619!3.87e-07!22;UBERON:0009569!9.60e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.47e-23;6!UBERON:0002358;8.47e-23;6!UBERON:0003684;8.47e-23;6!UBERON:0001178;8.47e-23;6!UBERON:0004457;1.41e-15;9!UBERON:0000042;1.41e-15;9!UBERON:0002190;2.59e-12;3!UBERON:0002072;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.46e-23,6;UBERON:0002358,9.46e-23,6;UBERON:0003684,9.46e-23,6;UBERON:0001178,9.46e-23,6;UBERON:0002190,2.31e-12,3;UBERON:0004457,6.34e-12,12;UBERON:0000042,6.34e-12,12;UBERON:0002417,2.25e-09,60;UBERON:0000916,2.25e-09,60;UBERON:0002072,6.13e-08,5;UBERON:0009569,8.32e-08,112 | |||
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|short_description=p18@RIMS2 | |short_description=p18@RIMS2 | ||
}} | }} |
Latest revision as of 01:20, 25 September 2015
Short description: | p18@RIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_RIMS2_5end |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | 115bp_to_ENST00000523362_5end |
EntrezGene: | RIMS2 |
HGNC: | 17283 |
UniProt: | E5RI36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 2.31e-12 | 3 |
adipocyte of omentum tissue | 2.89e-12 | 3 |
omentum preadipocyte | 3.24e-12 | 3 |
fat cell | 8.46e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.46e-23 | 6 |
peritoneum | 9.46e-23 | 6 |
abdominal cavity | 9.46e-23 | 6 |
visceral peritoneum | 9.46e-23 | 6 |
subcutaneous adipose tissue | 2.31e-12 | 3 |
cavity lining | 6.34e-12 | 12 |
serous membrane | 6.34e-12 | 12 |
abdominal segment of trunk | 2.25e-09 | 60 |
abdomen | 2.25e-09 | 60 |
hypodermis | 6.13e-08 | 5 |
subdivision of trunk | 8.32e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.44e-09 | 4 |