FFCP PHASE1:Hg19::chr20:30347776..30347785,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22974 | |EntrezGene=22974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1249 | |HGNC=1249 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULW0 | |UniProt=Q9ULW0 | ||
|association_with_transcript=-90bp_to_AF244547_5end | |association_with_transcript=-90bp_to_AF244547_5end | ||
|cluster_id=chr20:30347776..30347785,+ | |||
|coexpression_cluster_id=C3623 | |coexpression_cluster_id=C3623 | ||
|description=CAGE_peak_11_at_TPX2_5end | |description=CAGE_peak_11_at_TPX2_5end | ||
|id=chr20:30347776..30347785,+ | |id=chr20:30347776..30347785,+ | ||
|ontology_enrichment_celltype=CL:0002592;3.27e-23;3 | |ontology_enrichment_celltype=CL:0002494!3.71e-23!16;CL:0002548!2.34e-16!6;CL:0002592!3.72e-15!3;CL:0002557!4.53e-12!1;CL:0000680!2.18e-08!57;CL:0000056!2.18e-08!57;CL:0000355!2.18e-08!57;CL:0000359!3.14e-08!32;CL:0000055!8.87e-08!180 | ||
| | |ontology_enrichment_celltype_v019=CL:0002592;3.27e-23;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002592,2.62e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.38e-27;10!UBERON:0005564;2.38e-27;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000473;7.68e-34;8!UBERON:0003135;5.49e-25;11!UBERON:0003498;3.27e-23;3!UBERON:0005985;3.27e-23;3!UBERON:0001621;3.27e-23;3!UBERON:0000991;1.09e-13;21!UBERON:0003101;4.01e-13;22!UBERON:0000079;4.01e-13;22 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000948!9.18e-21!24;UBERON:0005498!9.18e-21!24;UBERON:0004140!9.18e-21!24;UBERON:0009881!9.18e-21!24;UBERON:0004141!9.18e-21!24;UBERON:0003084!9.18e-21!24;UBERON:0007005!9.18e-21!24;UBERON:0004139!9.18e-21!24;UBERON:0004291!9.18e-21!24;UBERON:0003498!8.97e-20!5;UBERON:0005985!8.97e-20!5;UBERON:0007100!2.16e-18!27;UBERON:0001621!3.72e-15!3;UBERON:0004872!4.02e-11!84;UBERON:0004535!5.70e-10!110;UBERON:0001009!1.16e-09!113;UBERON:0003914!3.74e-09!118;UBERON:0001637!1.09e-08!42;UBERON:0003509!1.09e-08!42;UBERON:0004572!1.09e-08!42;UBERON:0004573!6.46e-08!33;UBERON:0004571!6.46e-08!33;UBERON:0001134!8.60e-08!61;UBERON:0002036!8.60e-08!61;UBERON:0003082!8.60e-08!61;UBERON:0002385!1.60e-07!63;UBERON:0001015!1.60e-07!63;UBERON:0000383!1.60e-07!63;UBERON:0000914!3.65e-07!83;UBERON:0002329!3.65e-07!83;UBERON:0003077!3.65e-07!83;UBERON:0003059!3.65e-07!83;UBERON:0007282!3.65e-07!83;UBERON:0009618!3.65e-07!83;UBERON:0007285!3.65e-07!83;UBERON:0003103!8.64e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.68e-34;8!UBERON:0003135;5.49e-25;11!UBERON:0003498;3.27e-23;3!UBERON:0005985;3.27e-23;3!UBERON:0001621;3.27e-23;3!UBERON:0000991;1.09e-13;21!UBERON:0003101;4.01e-13;22!UBERON:0000079;4.01e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.08e-34,8;UBERON:0003135,6.20e-25,11;UBERON:0001621,2.62e-23,3;UBERON:0003498,1.40e-14,5;UBERON:0005985,1.40e-14,5;UBERON:0000991,1.16e-13,21;UBERON:0009196,1.16e-13,21;UBERON:0009117,1.16e-13,21;UBERON:0005564,1.16e-13,21;UBERON:0004176,4.26e-13,22;UBERON:0003101,4.26e-13,22;UBERON:0000079,4.26e-13,22;UBERON:0002323,7.74e-07,46 | |||
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|short_description=p11@TPX2 | |short_description=p11@TPX2 | ||
}} | }} |
Latest revision as of 01:25, 25 September 2015
Short description: | p11@TPX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TPX2_5end |
Coexpression cluster: | C3623_testis_Smooth_Fibroblast_bone_Melanocyte_Myoblast_Multipotent |
Association with transcript: | -90bp_to_AF244547_5end |
EntrezGene: | TPX2 |
HGNC: | 1249 |
UniProt: | Q9ULW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 9.08e-34 | 8 |
male reproductive organ | 6.20e-25 | 11 |
coronary artery | 2.62e-23 | 3 |
heart blood vessel | 1.40e-14 | 5 |
coronary vessel | 1.40e-14 | 5 |
gonad | 1.16e-13 | 21 |
indifferent external genitalia | 1.16e-13 | 21 |
indifferent gonad | 1.16e-13 | 21 |
gonad primordium | 1.16e-13 | 21 |
external genitalia | 4.26e-13 | 22 |
male organism | 4.26e-13 | 22 |
male reproductive system | 4.26e-13 | 22 |
body cavity | 7.74e-07 | 46 |