FFCP PHASE2:Hg19::chr5:139943886..139943967,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10307 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:20708 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=20708 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E7EX91,F5H1N5,Q9BYD4,D6RJB2 | ||
|association_with_transcript=0bp_to_ENST00000358580,ENST00000506165,ENST00000508496,ENST00000509914,ENST00000511896,uc003lgc.1_5end | |association_with_transcript=0bp_to_ENST00000358580,ENST00000506165,ENST00000508496,ENST00000509914,ENST00000511896,uc003lgc.1_5end | ||
|cluster_id=chr5:139943886..139943967,- | |cluster_id=chr5:139943886..139943967,- | ||
Latest revision as of 02:03, 25 September 2015
| Short description: | p1@APBB3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_APBB3_5end |
| Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
| Association with transcript: | 0bp_to_ENST00000358580, ENST00000506165, ENST00000508496, ENST00000509914, ENST00000511896, uc003lgc.1_5end |
| EntrezGene: | APBB3 |
| HGNC: | 20708 |
| UniProt: | E7EX91F5H1N5Q9BYD4D6RJB2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@APBB3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 6.76e-22 | 42 |
| CD14-positive, CD16-negative classical monocyte | 6.76e-22 | 42 |
| defensive cell | 6.80e-21 | 48 |
| phagocyte | 6.80e-21 | 48 |
| myeloid leukocyte | 9.75e-17 | 72 |
| macrophage dendritic cell progenitor | 1.46e-14 | 61 |
| granulocyte monocyte progenitor cell | 2.00e-14 | 67 |
| monopoietic cell | 2.85e-14 | 59 |
| monocyte | 2.85e-14 | 59 |
| monoblast | 2.85e-14 | 59 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.17e-25 | 114 |
| neural tube | 9.66e-16 | 56 |
| neural rod | 9.66e-16 | 56 |
| future spinal cord | 9.66e-16 | 56 |
| neural keel | 9.66e-16 | 56 |
| regional part of nervous system | 6.39e-15 | 53 |
| regional part of brain | 6.39e-15 | 53 |
| hematopoietic system | 1.55e-13 | 98 |
| blood island | 1.55e-13 | 98 |
| bone marrow | 7.98e-13 | 76 |
Showing 1 to 10 of 45 entries
