FFCP PHASE1:Hg19::chr2:225875626..225875638,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100616207 | |EntrezGene=100616207 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=41622 | |HGNC=41622 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-369bp_to_NR_039641_5end | |||
|cluster_id=chr2:225875626..225875638,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_1_at_MIR4439_5end | |||
|id=chr2:225875626..225875638,- | |||
|ontology_enrichment_celltype=CL:0002274!5.09e-20!5;CL:0000457!5.09e-20!5;CL:0002191!5.09e-20!5;CL:0000097!5.09e-20!5;CL:0000831!5.09e-20!5;CL:0002028!5.09e-20!5;CL:0000557!8.93e-19!71;CL:0000766!1.98e-15!76;CL:0000839!2.68e-15!70;CL:0002057!4.28e-15!42;CL:0000860!7.26e-14!45;CL:0002031!6.70e-12!124;CL:0002009!2.57e-11!65;CL:0000763!2.87e-11!112;CL:0000049!2.87e-11!112;CL:0000738!5.66e-11!140;CL:0000163!5.79e-11!9;CL:0002194!8.67e-09!63;CL:0000576!8.67e-09!63;CL:0000040!8.67e-09!63;CL:0000559!8.67e-09!63;CL:0000988!9.62e-09!182;CL:0001014!1.19e-08!2;CL:0001016!1.19e-08!2;CL:0002032!1.98e-08!165;CL:0000837!1.98e-08!165;CL:0000037!7.41e-08!172;CL:0000566!7.41e-08!172 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.60e-79;5!CL:0000163;2.03e-44;9!CL:0000766;2.89e-12;69!CL:0000151;1.51e-10;36!CL:0000860;1.07e-07;33!CL:0002057;1.07e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.12e-79,5;CL:0002028,2.12e-79,5;CL:0000163,1.82e-44,9;CL:0000839,1.33e-23,66;CL:0000557,2.94e-23,67;CL:0000766,1.13e-21,72;CL:0000763,1.54e-14,108;CL:0000049,1.54e-14,108;CL:0002031,4.25e-13,120;CL:0000738,1.45e-11,136;CL:0000151,1.55e-11,36;CL:0000860,7.93e-10,42;CL:0002057,7.93e-10,42;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177;CL:0000473,1.20e-08,48;CL:0000234,1.20e-08,48;CL:0002194,5.44e-07,59;CL:0000576,5.44e-07,59;CL:0000040,5.44e-07,59;CL:0000559,5.44e-07,59;CL:0002009,8.93e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.14e-18!80;UBERON:0001474!3.35e-16!86;UBERON:0002390!1.26e-15!102;UBERON:0003061!1.26e-15!102;UBERON:0002193!1.03e-13!112;UBERON:0004765!5.23e-13!101;UBERON:0001434!5.23e-13!101;UBERON:0002405!6.36e-12!115;UBERON:0002204!3.05e-08!167;UBERON:0003081!9.29e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.49e-20,76;UBERON:0001474,4.48e-19,82;UBERON:0004765,2.09e-17,90;UBERON:0002405,7.48e-17,93;UBERON:0002390,5.28e-16,98;UBERON:0003061,5.28e-16,98;UBERON:0001434,1.09e-15,100;UBERON:0002193,1.54e-14,108;UBERON:0002204,2.03e-09,167;UBERON:0003081,9.83e-08,203 | |||
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| ||
|short_description=p1@MIR4439 | |||
}} | }} |
Latest revision as of 02:05, 25 September 2015
Short description: | p1@MIR4439 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR4439_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -369bp_to_NR_039641_5end |
EntrezGene: | MIR4439 |
HGNC: | 41622 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.12e-79 | 5 |
basophil mast progenitor cell | 2.12e-79 | 5 |
endocrine cell | 1.82e-44 | 9 |
myeloid lineage restricted progenitor cell | 1.33e-23 | 66 |
granulocyte monocyte progenitor cell | 2.94e-23 | 67 |
myeloid leukocyte | 1.13e-21 | 72 |
myeloid cell | 1.54e-14 | 108 |
common myeloid progenitor | 1.54e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 4.25e-13 | 120 |
leukocyte | 1.45e-11 | 136 |
secretory cell | 1.55e-11 | 36 |
classical monocyte | 7.93e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.93e-10 | 42 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
defensive cell | 1.20e-08 | 48 |
phagocyte | 1.20e-08 | 48 |
monopoietic cell | 5.44e-07 | 59 |
monocyte | 5.44e-07 | 59 |
monoblast | 5.44e-07 | 59 |
promonocyte | 5.44e-07 | 59 |
macrophage dendritic cell progenitor | 8.93e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.49e-20 | 76 |
bone element | 4.48e-19 | 82 |
skeletal element | 2.09e-17 | 90 |
immune system | 7.48e-17 | 93 |
hematopoietic system | 5.28e-16 | 98 |
blood island | 5.28e-16 | 98 |
skeletal system | 1.09e-15 | 100 |
hemolymphoid system | 1.54e-14 | 108 |
musculoskeletal system | 2.03e-09 | 167 |
lateral plate mesoderm | 9.83e-08 | 203 |